Herbaspirillum sp. DW155: HBDW_23000
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Entry
HBDW_23000 CDS
T10195
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_23000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_23000
Transporters [BR:
hew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HBDW_23000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
ABC_ATPase
AAA_23
RsgA_GTPase
AAA_25
AAA_29
AAA_22
AAA_15
AAA_16
AAA_28
AAA_30
AAA_33
AAA_14
AAA_18
Zeta_toxin
AAA
nSTAND_NTPase5
Rad17
cobW
Guanylate_kin
MMR_HSR1
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
BEV15512
LinkDB
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Position
complement(2534208..2535977)
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AA seq
589 aa
AA seq
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MTTQQPLSWKQIVHTWFGNTPAQERQRYLRALCIMMLDGLLSAIPYLCAAILLGSLLRGT
QAAPPYWTVLLACACPLLRLLMTSSAQTALFIEGYRVTGQLRSSLVAHAMKVPLGLLARA
FPSERLSRFIVHDLRWVEEFSSFGAAQQISNVLLLTALIGALAWLDLTLAFLVVVLLAAA
VMVLERIGRWMLASARQQQAQLEQVSRHLGELSDGMPVLRAYQDDARIKQRFTQHNQQLR
QFYHRTSWKLAPGLLLSNSLFGLVMAVALSFAGWRYLDGHLDGAQLLIMLAVLSTLSLPI
ESLLVQRFQALASKEAMAAHAALLAQPALPDGHAEVAAGAAQIRLEQVSFGYWPGEPVLH
NLDLDFPAGKTTVIVGPSGAGKSTLLQLLARFHDTSSGRILVDGQDIRAVTLGDHLARIS
MVFQDGLLFQDSIASNIAAGARHATPEQLRAALRAAQCEVFVDAMPDGADTQLAELGRNL
SGGQKQRLTIARALLKDAPVVLFDEMTSALDAENDHAIRCALRELLPGRTTIMVAHRLDH
AVAADQVVVMDQGKVIDCGSHAELLRRCTLYQQLWSAWSQGQSWQLGLH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccaacagcccctgagctggaagcagattgtccacacctggttcggcaacacc
cccgcccaggagcggcaacgttatctgcgcgcactgtgcatcatgatgctggatggtctg
ctcagcgctatcccctatctctgcgcggccatcttgctgggcagtctgctgcgcgggacg
caggcagcaccaccttactggacggtgctgctggcgtgcgcctgcccgctgctgcggctg
ctgatgacttcctctgcccagactgccctgttcatcgagggctatcgcgtcaccgggcaa
ttacgctccagcctggtcgcccacgccatgaaggttccgctgggcttgctcgcgcgcgct
tttcctagcgagcgcctgtcgcgcttcatcgtgcatgacctgcgctgggtggaagaattt
tcttccttcggggccgcccagcagatcagcaacgtcttgctgctgactgccctgatcggc
gcgctggcgtggctggacctgacgctggccttcctggtcgtggtcttgctggccgcagcg
gtgatggtgctggaacggatcggccgctggatgctggccagcgcacggcagcagcaggcg
cagctggagcaggtctcgcgccatctgggcgagctcagcgacggcatgccggtactgcgc
gcctaccaggacgatgcccgcatcaagcagcgattcacccaacacaaccagcaactgcga
cagttctatcaccgcaccagctggaagctggcgccaggcctgttgctctccaacagcctg
ttcggcttggtcatggccgtcgccctcagctttgccggctggcgctatctggacggccat
ctcgacggcgcccaactgctcatcatgctggcggtattgagcacactgagcctgcccatc
gaatccctgttggtgcaacgcttccaggcgctggccagcaaggaggccatggccgctcat
gctgccctgctggctcaaccggctcttcccgacggccacgcggaggtggcagcgggagcg
gcgcagatccggctggagcaggtcagcttcggttactggcctggcgagccggtgctgcac
aatctcgatctcgatttcccggctggcaagaccaccgtgatcgtcggccccagcggtgcg
ggcaagtcgaccctgctgcaactgctggcgcgcttccacgacaccagcagtggtcgcatc
ctggtggacggtcaggatattcgcgcggttacgctgggcgaccatctggcgcgcatcagc
atggtgttccaggatggcctgctgttccaggacagcatcgcaagcaacatcgcagccggc
gcccgccatgccacgccggagcaactacgcgccgctctgcgcgccgcccagtgcgaagtt
ttcgtagatgcgatgccggatggagccgacacccagctagctgaattaggacgcaatctc
tccggcggacagaagcaaagactcaccatcgcccgcgccttgctcaaggatgcgcctgtc
gtgctgttcgacgaaatgacctcggcgctggacgctgaaaatgatcacgccatccgctgc
gcgctgcgtgagctgctgccgggacgcacaactatcatggtggcgcaccgcctggatcac
gccgtcgcggcagaccaggtcgtagtgatggatcagggcaaggtgatcgactgcggcagc
catgccgaactgctacgccgctgcacgctttaccagcagctttggtcggcatggagccaa
gggcagtcctggcagttgggcctgcattga
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