Herbaspirillum sp. DW155: HBDW_25750
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Entry
HBDW_25750 CDS
T10195
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HBDW_25750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hew03021
]
HBDW_25750
Transcription machinery [BR:
hew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HBDW_25750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_31
PhyR_sigma-like
HTH_23
HsdM_C
PhyR_sigma2
HTH_11
Sigma70_ECF
HTH_IclR
HTH_24
HTH_38
HTH_36
Motif
Other DBs
NCBI-ProteinID:
BEV15787
LinkDB
All DBs
Position
complement(2831157..2831681)
Genome browser
AA seq
174 aa
AA seq
DB search
MPVPPTADAQHVQTLYREHHGWLQQWLRRRLGCSVDAADLAQDTFLRVLGKPQALADLRE
PRAWLSRIAHGLVVDKVRRDEVERACLEAIAHLPAPEVISPEARMLLVEALAAIDAMLDG
LGARAREAFLMSRLEDLSYAQIAQRMGVSLSSVEKYMAASIRHCYLMRQAWQAS
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgcccaccgccgacgcccagcacgtccagacgctctatcgcgagcatcat
ggctggctgcagcagtggctgcggcggcgtctgggctgtagtgtggatgcggccgatctg
gcgcaggatactttcctgcgtgtgctgggcaagccgcaggcgctggccgacctgcgcgag
ccgcgcgcctggctcagccgcatcgcgcacgggctggtggtggacaaggtgcggcgtgat
gaagtcgagcgcgcctgcctggaggccatcgcccatttgccggcgccggaggtgatctcg
cccgaggcgcgcatgctgctggtggaggcgctggctgccattgacgccatgctcgacggc
ctgggcgcccgggcgcgcgaagcctttctgatgtcccgtctggaagacctgagctacgcg
cagattgcccagcgcatgggtgtctcgctcagcagcgtcgaaaaatacatggccgcgtcg
atccgccattgctacctgatgcggcaagcctggcaggcgagctag
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integrated database retrieval system
