KEGG   Herbaspirillum sp. DW155: HBDW_27500
Entry
HBDW_27500        CDS       T10195                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
hew  Herbaspirillum sp. DW155
Pathway
hew00061  Fatty acid biosynthesis
hew00071  Fatty acid degradation
hew01100  Metabolic pathways
hew01212  Fatty acid metabolism
hew02024  Quorum sensing
hew04146  Peroxisome
Module
hew_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:hew00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    HBDW_27500
   00071 Fatty acid degradation
    HBDW_27500
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    HBDW_27500
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HBDW_27500
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:hew01004]
    HBDW_27500
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hew04147]
    HBDW_27500
Enzymes [BR:hew01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     HBDW_27500
Lipid biosynthesis proteins [BR:hew01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   HBDW_27500
Exosome [BR:hew04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   HBDW_27500
  Exosomal proteins of breast cancer cells
   HBDW_27500
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: BEV15962
LinkDB
Position
complement(3023284..3025245)
AA seq 653 aa
MVETKQDQEAATFPRLLLAHARQRPERAAFREKDLGIWQTTPWRQVAEEVRSFACGLAAL
GFRRGMSLAIIGNNCPRLYWAMSAAQALGGMPVPLYQDAPAADMAYVLADANVDFVMAED
QEQVDKVFEIKENLPRIAHVIYDDERGMRNYHQPELLSFARVQELGRAYERAHPGFFEQE
VAAGSPDDVAIILYTSGTTGKPKGVCHSHRAMITTATTLVEFDHLDENDDILCYLPLAWV
GDFLYSFAQQHVAGFCLNCPESPNTVMTDLREIGPTYYFAPPRVYENILTQVMIRIEDAG
WFKRKMFHGFMKVARRVGMRILDGKPGVSLADRVQYAIGDLLVYGPLKNVLGMSRLRVAY
TGGEAIGPDLFDFYRSLGINLKQLYGMTETCVTVCMQPSGDVKLDSVGRPMKGVEVRIDA
NGEVLVRSPGLMKEYFKRPDATAEAIDQDGYFHTGDAGFFDSDGHLKIIDRAKDVGKMAC
GSMFAPKYIENKLKFFPFIKEAVTFGNGREQCMAFINIDMDAVGNWAERRNLAYSGYTDL
AANPAVYDLVRECVEKVNADLVADPLLADSQIHRFLILHKELDPDDEELTRTRKVRRGFI
ADKYAVLIEALYAGRASQYIETQVKFEDGRQGMISADLRIADAKTFKTLQSAA
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggtggagacgaaacaagaccaagaggccgcgacctttccgcggctgttgctggcgcat
gcccgccagcgtcccgaacgggcggccttccgcgagaaggacctgggcatctggcagacc
acgccctggcgccaggtggccgaggaagtgcgcagctttgcctgtggcctggcggcattg
ggattccggcgcggtatgagcctggccattatcggcaacaactgcccgcgcctgtactgg
gccatgagcgccgcccaggcgctgggcggcatgccggtgccgctgtaccaggatgccccg
gccgccgacatggcctacgtgctggccgatgccaacgtcgatttcgtcatggccgaagac
caggaacaggtcgacaaggtattcgagatcaaggaaaacctgccccgcatcgcccacgtc
atctatgacgatgaacgcggcatgcgcaactaccaccagcccgaactgctgtcctttgcc
cgcgtgcaggaactgggccgcgcctatgagcgcgcgcatccgggattcttcgagcaggaa
gtggcggcaggttcgcccgatgacgtggccatcatcctctacacctccggcaccaccggc
aagcccaagggcgtgtgccactcgcatcgcgcgatgatcaccactgccaccacgctggtg
gagttcgatcatctggatgagaacgacgacatcctctgctacctgccgctggcctgggta
ggcgatttcctgtattccttcgcgcagcagcacgtggccggcttctgcctcaattgcccg
gagtcgcccaatacggtgatgacggacctgcgcgagatcggcccgacctattacttcgca
ccgccgcgcgtctacgaaaacatcctcacgcaagtgatgatccgcatcgaggatgccggc
tggttcaagcgcaagatgttccatggtttcatgaaggtggcgcgccgggtcggcatgcgc
atcctcgatggcaagcccggcgtgtcgctggcagaccgcgtgcaatacgccatcggcgac
ctgctggtctacgggccgctgaagaacgtgctgggcatgtcgcgcctgcgcgtggcctac
accggcggcgaagccatcgggccggacctgttcgatttctatcgttcgctgggcatcaac
ctgaagcagctctacggcatgaccgagacctgcgtgacggtctgcatgcaaccctcgggc
gacgtcaagctcgatagcgtgggccgccccatgaagggcgtggaggtgcgcatcgatgcc
aatggtgaagtgctggtgcgctctccgggcctgatgaaggaatatttcaagcggcccgat
gccaccgccgaagccatcgaccaggacggctatttccataccggagatgcaggtttcttc
gacagcgacggccatctcaaaatcatcgaccgcgccaaggatgtcggcaagatggcctgc
ggtagcatgttcgcgcccaagtacatcgagaacaagctgaagttcttccccttcatcaag
gaagcggtgaccttcggcaatggccgcgaacaatgcatggccttcatcaacatcgacatg
gatgccgtgggcaactgggctgagcgccgcaacctggcctacagcggctacaccgacctg
gcggccaatccggcggtctacgacttggtgcgcgaatgcgtggaaaaggtcaacgccgat
ctggtggcggaccccttgctggccgattcgcagatccatcgcttcctgatcctgcacaag
gaactcgatcccgatgacgaggagctgacccgcacccgcaaggtccgacgcggcttcatc
gccgacaagtatgcggtgctcatcgaggcgctctatgcgggccgtgcgtcgcagtacatc
gagacccaggtcaagttcgaagatggccgccagggcatgatctcggccgacctcaggatc
gccgacgccaagaccttcaagacgctgcaaagcgccgcctga

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