Herbaspirillum sp. DW155: HBDW_27500
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Entry
HBDW_27500 CDS
T10195
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00061
Fatty acid biosynthesis
hew00071
Fatty acid degradation
hew01100
Metabolic pathways
hew01212
Fatty acid metabolism
hew02024
Quorum sensing
hew04146
Peroxisome
Module
hew_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HBDW_27500
00071 Fatty acid degradation
HBDW_27500
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBDW_27500
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_27500
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hew01004
]
HBDW_27500
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hew04147
]
HBDW_27500
Enzymes [BR:
hew01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HBDW_27500
Lipid biosynthesis proteins [BR:
hew01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HBDW_27500
Exosome [BR:
hew04147
]
Exosomal proteins
Exosomal proteins of breast milk
HBDW_27500
Exosomal proteins of breast cancer cells
HBDW_27500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BEV15962
LinkDB
All DBs
Position
complement(3023284..3025245)
Genome browser
AA seq
653 aa
AA seq
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MVETKQDQEAATFPRLLLAHARQRPERAAFREKDLGIWQTTPWRQVAEEVRSFACGLAAL
GFRRGMSLAIIGNNCPRLYWAMSAAQALGGMPVPLYQDAPAADMAYVLADANVDFVMAED
QEQVDKVFEIKENLPRIAHVIYDDERGMRNYHQPELLSFARVQELGRAYERAHPGFFEQE
VAAGSPDDVAIILYTSGTTGKPKGVCHSHRAMITTATTLVEFDHLDENDDILCYLPLAWV
GDFLYSFAQQHVAGFCLNCPESPNTVMTDLREIGPTYYFAPPRVYENILTQVMIRIEDAG
WFKRKMFHGFMKVARRVGMRILDGKPGVSLADRVQYAIGDLLVYGPLKNVLGMSRLRVAY
TGGEAIGPDLFDFYRSLGINLKQLYGMTETCVTVCMQPSGDVKLDSVGRPMKGVEVRIDA
NGEVLVRSPGLMKEYFKRPDATAEAIDQDGYFHTGDAGFFDSDGHLKIIDRAKDVGKMAC
GSMFAPKYIENKLKFFPFIKEAVTFGNGREQCMAFINIDMDAVGNWAERRNLAYSGYTDL
AANPAVYDLVRECVEKVNADLVADPLLADSQIHRFLILHKELDPDDEELTRTRKVRRGFI
ADKYAVLIEALYAGRASQYIETQVKFEDGRQGMISADLRIADAKTFKTLQSAA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacgaaacaagaccaagaggccgcgacctttccgcggctgttgctggcgcat
gcccgccagcgtcccgaacgggcggccttccgcgagaaggacctgggcatctggcagacc
acgccctggcgccaggtggccgaggaagtgcgcagctttgcctgtggcctggcggcattg
ggattccggcgcggtatgagcctggccattatcggcaacaactgcccgcgcctgtactgg
gccatgagcgccgcccaggcgctgggcggcatgccggtgccgctgtaccaggatgccccg
gccgccgacatggcctacgtgctggccgatgccaacgtcgatttcgtcatggccgaagac
caggaacaggtcgacaaggtattcgagatcaaggaaaacctgccccgcatcgcccacgtc
atctatgacgatgaacgcggcatgcgcaactaccaccagcccgaactgctgtcctttgcc
cgcgtgcaggaactgggccgcgcctatgagcgcgcgcatccgggattcttcgagcaggaa
gtggcggcaggttcgcccgatgacgtggccatcatcctctacacctccggcaccaccggc
aagcccaagggcgtgtgccactcgcatcgcgcgatgatcaccactgccaccacgctggtg
gagttcgatcatctggatgagaacgacgacatcctctgctacctgccgctggcctgggta
ggcgatttcctgtattccttcgcgcagcagcacgtggccggcttctgcctcaattgcccg
gagtcgcccaatacggtgatgacggacctgcgcgagatcggcccgacctattacttcgca
ccgccgcgcgtctacgaaaacatcctcacgcaagtgatgatccgcatcgaggatgccggc
tggttcaagcgcaagatgttccatggtttcatgaaggtggcgcgccgggtcggcatgcgc
atcctcgatggcaagcccggcgtgtcgctggcagaccgcgtgcaatacgccatcggcgac
ctgctggtctacgggccgctgaagaacgtgctgggcatgtcgcgcctgcgcgtggcctac
accggcggcgaagccatcgggccggacctgttcgatttctatcgttcgctgggcatcaac
ctgaagcagctctacggcatgaccgagacctgcgtgacggtctgcatgcaaccctcgggc
gacgtcaagctcgatagcgtgggccgccccatgaagggcgtggaggtgcgcatcgatgcc
aatggtgaagtgctggtgcgctctccgggcctgatgaaggaatatttcaagcggcccgat
gccaccgccgaagccatcgaccaggacggctatttccataccggagatgcaggtttcttc
gacagcgacggccatctcaaaatcatcgaccgcgccaaggatgtcggcaagatggcctgc
ggtagcatgttcgcgcccaagtacatcgagaacaagctgaagttcttccccttcatcaag
gaagcggtgaccttcggcaatggccgcgaacaatgcatggccttcatcaacatcgacatg
gatgccgtgggcaactgggctgagcgccgcaacctggcctacagcggctacaccgacctg
gcggccaatccggcggtctacgacttggtgcgcgaatgcgtggaaaaggtcaacgccgat
ctggtggcggaccccttgctggccgattcgcagatccatcgcttcctgatcctgcacaag
gaactcgatcccgatgacgaggagctgacccgcacccgcaaggtccgacgcggcttcatc
gccgacaagtatgcggtgctcatcgaggcgctctatgcgggccgtgcgtcgcagtacatc
gagacccaggtcaagttcgaagatggccgccagggcatgatctcggccgacctcaggatc
gccgacgccaagaccttcaagacgctgcaaagcgccgcctga
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