Herbaspirillum sp. DW155: HBDW_28180
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Entry
HBDW_28180 CDS
T10195
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02020
Two-component system
Brite
Transporters [BR:
hew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HBDW_28180
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BEV16030
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Position
complement(3106740..3109976)
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AA seq
1078 aa
AA seq
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MNPSSLFIRRPVATLLLMIAVVLSGLFAYRTLSISALPQVDYPTIQVTTLYPGAGPEVMT
TAVTAPLERQLGQMAGLAQMYSTSAGGASVITLKFNLALSLDVAEQEVQAAINAANALLP
SGLPNPPTYKKVNPADTAVLTLAATSESLPLTQVQDLVNTRIALKLSQVSGVGLVTLAGG
QQLAIRVRANPTALAAHGLTLENLYNVINNGNVNGSKGGFDGPAHSVTIDANDQLRSAEE
YGNLVVAYQNGQALFLRDVASIEQAPENVYQAAWAGTKPAIVINIQRQPGANVVQVVDSI
KALLPSLQQSLPGAVKLEILSDRTQTIRASISDVQFELMLSIALVVMVSFLFLRTVSATL
IPSVAVPLSLVGTFGVMYLAGFSLNNLTLMALTIATGFVIDDAIVVVENIQRHLENGDSP
MEAAFKGSREIGFTIISLTFSLIAVLIPLLFMGDVVGRLFREFSITLAVSILVSMLVSLT
LTPMLCAYLLRHIPSEQEGRFARWSAGRFDRLLQAYERSLGWVLRHQRLTLVVAAASLVL
TALLYMAVPKGFFPIQDTGQLLGVTTAPQNVSFAEMSRRQQALAAVIQQDPAVKSISSVV
GVDGANNTSLSNGRLQIELKSFDERSDRAPAVIERLRAAAAQVPGIRLYLTASQDLSVDD
QVTPSQYQLTLSTPTQSDLETWAPRLQAALARHPELRDITSNLQNSSPVAYVDMNRMALA
RYGLTATDVDTALYNAYGQRLVSTIFTQANQYRVVLEVAPQFRQDVSAFDQLYLANANST
SGSSGSTSGSSSSSSSSGSSGSSGSTASSSSSSSTAGSTTLTPMVPLRNVARIQERVGYQ
SRSRLNQTPAVTLSFNLGQGYSLEQARAAVSEAVQEIGLPDTISLRYQGAAQAFASATSN
TLWLILAAVITMYIVLGVLYESFIHPVTVLSTLPSAAIGALLALLLSGSDFSLIALIGVI
LLIGIVKKNAIMMIDFALQAQKEGKSAFDAIRQACVMRFRPIMMTTMAALLGAVPLMLAT
GSGAELRRPLGLVIVGGLLLSQLLTLFTTPVIYLFFERASVVVRRRWAARASSLGESA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatccagtctctttatccggcggccggttgccacgctgctgttgatgatcgcg
gtggtgctgtcggggctgttcgcttaccgtacgctgtcgatttcggcgctgccgcaggtg
gactatcccaccatccaggtcaccacgctctatccgggggccggcccggaagtgatgacc
accgccgtgaccgcaccgctggagcgccagctcggccagatggccgggctggcccagatg
tattccaccagtgccggcggtgcctcggtcatcacgctcaagttcaatctcgcgctgtcg
ctggacgtggccgagcaggaagtgcaggcggccatcaatgcggccaatgcgctgctgccc
tcgggcctgcccaacccgcccacctacaagaaggtcaacccggccgataccgccgtgctg
acgctggcggccacctccgaatcgctgccgctgacccaggtgcaggatctggtcaatacc
cgcatcgccctgaagctgtcgcaggtctccggtgtggggctggtgacgctggcgggcggc
cagcaactggccatccgcgtgcgggccaatccgaccgcgctggccgcgcatggcctgaca
ctggaaaatctctacaacgtcatcaacaacggcaacgtcaacggttccaagggcggcttc
gatggtccggcccattcggtgaccatcgatgccaatgaccagctgcgcagcgccgaggag
tacggcaatctggtggtggcctaccagaacgggcaggccctgttcctgcgcgatgtcgcc
agcatcgagcaggcgccggaaaacgtctaccaggcggcctgggccggcaccaagccggcc
atcgtcatcaatatccagcgccagccgggcgccaacgtggtccaggtggtggacagcatc
aaggccttgctcccctcgttgcagcagagcctgcccggcgcggtgaagctggagatcctg
agcgaccgcacgcagaccatccgcgcttccatttccgacgtgcagttcgagctgatgctc
tccattgcgctggtggtgatggtgtccttcctgttcctgcgcacggtgtcggccacgctc
attcccagcgtggcggtaccgctgtcgctggtgggaactttcggcgtgatgtatctggcc
ggtttttccctgaacaacctgaccctgatggcgctgaccattgccaccggcttcgtcatc
gacgatgccatcgtggtagtggagaacatccagcgccacctggaaaatggcgacagcccc
atggaggccgccttcaagggatcgcgcgagatcggctttaccatcatctcgctgacgttc
tcgctcattgcggtgctcattccgctgctgttcatgggggacgtggtggggcggctgttc
cgcgaattctccattacgctggccgtctccattctggtgtcgatgctggtctcgctcacg
ctcacgccgatgttgtgtgcctatctgctgcgccatattccgtccgagcaggaaggacgt
ttcgcccgctggagcgccggccgtttcgatcgcctgttgcaggcctatgagcgcagcctg
ggctgggtgctgcgacatcagcgcctcacgctggtggtggctgccgccagtctggtgttg
acggcgctgctgtacatggccgtaccgaagggcttcttcccgatccaggataccgggcaa
ctgctgggggtgaccacggcaccgcagaatgtctcgttcgcggaaatgtcgcgccgtcag
caggcgctggctgcggtcattcagcaggaccctgcggttaagtcgatctcctcggtggtg
ggggtggatggtgccaacaatacctcgctctccaatggccgtctgcagatcgaactgaag
tccttcgatgagcgcagcgaccgcgcaccggccgtcatcgagcgcctgcgcgcggcagcg
gcgcaagtgccgggcatcaggctctatctgaccgccagccaggacctgagcgtggatgat
caggtcacgccgagccaatatcagctcaccctgtccacgccgacccaatccgatctggaa
acctgggcgccgcgcctgcaggcggcactggccaggcatcccgaattgcgcgacatcacc
agcaatctgcagaacagcagtccggtggcctacgtcgacatgaaccgcatggcgctggcg
cgctacggcctcaccgccaccgacgtcgataccgccttgtacaacgcctatggacagcgc
ctggtctcgaccatcttcacccaggccaaccagtaccgcgtggtgctggaagtggcgccg
cagttccgccaggatgtgtcggccttcgatcagctgtacctggccaatgccaacagcaca
tcgggcagttccggcagtacctcaggcagctccagttcaagcagcagctccggcagttcc
ggtagttcgggcagcaccgccagcagctccagcagttcctcgactgctggcagtaccacg
ctcacgcccatggtgccgctgcgcaatgtggcgcgcattcaggagcgggtgggctaccag
agccgttcgcgtctgaaccagacgccggccgtgactctttccttcaatctgggccagggc
tattcgctggagcaggcacgcgcggccgtgagcgaggcggtgcaggagatcggtctgccc
gacaccatcagcctgcgctaccagggggcggcacaggcgtttgcgtcggccacctccaat
accttgtggctgatcctggcggcggtgatcacgatgtacatcgtgctgggcgtgctctat
gagagtttcatccatccggtgacggtgctgtcgaccctgccgtcggcagccatcggtgcc
ttgctggccctgttgctgagcggatcggacttcagcctcatcgccctgatcggggtgatc
ctgttgatcggcatcgtcaagaagaacgccatcatgatgatcgacttcgccctgcaggcg
cagaaagaaggcaagagcgccttcgatgcgatccggcaggcctgcgtcatgcgtttccgt
cccatcatgatgaccaccatggccgcgctcctgggcgccgtgccgctgatgctggcgacc
ggctccggtgccgaactgcggcgtccgctggggctggtgatcgtgggcgggctcttgttg
agccagttgctcacgctcttcaccacgccggtgatctatctgttctttgagcgggcaagc
gtcgtcgtcaggcgccgctgggccgcccgtgcatccagcctgggtgagtccgcatga
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