Herbaspirillum sp. DW155: HBDW_30780
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Entry
HBDW_30780 CDS
T10195
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hew Herbaspirillum sp. DW155
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hew03021
]
HBDW_30780 (rpoS)
Transcription machinery [BR:
hew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HBDW_30780 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
MC2
Motif
Other DBs
NCBI-ProteinID:
BEV16290
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Position
complement(3421849..3422808)
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AA seq
319 aa
AA seq
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MDDPIDEIDEPEVIDGDAADQPQEPAPAEGVDELKKVLAAELSTDTTQHYLNKIGAKPLL
TAAEELHFATQAKAGEFIARQKMIEHNLRLVVSIAKHYINRGVALLDLIEEGNLGLMRAI
DKFEPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHMVRELNQILRAKYHLEAQQRD
GRDASAEDIAHLVGRPVEEVQDVLALSEHAASLDTPLDNDPQASLMDLLPSAVEEHPDTR
AEGQEMALLIREWLKSLSEKQRVVVARRFGLDNDDPSTLEQLAGEMGITRERVRQVQQEA
LVKLKRLLASRGVSRDALF
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcccattgatgagatcgacgaaccggaagtgatcgacggcgatgccgccgac
cagccccaggagccggcgccagccgaaggcgtggacgagctcaagaaggtgctcgccgcc
gaactctctaccgacaccacccagcactatctcaacaagatcggcgccaagccgctgctg
acggctgccgaggaattgcactttgcgacccaggccaaggccggcgaattcatcgcgcgc
cagaagatgatcgagcacaacctgcggctggtggtgtcgatcgccaagcactacatcaac
cggggcgtggccctgctggatctgatcgaggaaggcaacctgggcctgatgcgcgccatc
gacaagttcgagcccgagcgcggtttccgcttctccacctacgccacctggtggatccgc
cagagcatcgagcgggccatcatgaatcaggcccgtaccgtgcggcttcccgtgcacatg
gtgcgcgagttgaaccagatattgcgcgcaaagtatcacctggaggcccagcaacgtgac
ggaagagacgccagcgcggaagacatcgcgcacctcgtcggccgcccggtcgaggaggta
caggatgtgcttgccctgtccgagcatgccgcctcgctggatacgccgctggacaacgac
ccccaggccagcctgatggacctcttgcccagtgccgtggaggagcatcccgatacgcgg
gccgaggggcaggaaatggccttgctgatccgcgaatggctcaagagcttgtctgaaaag
caacgcgtcgtcgtggcccggcgcttcggcctggacaacgatgatccctcgacgctggag
caactggccggcgaaatgggcatcacgcgggagcgtgtgcgccaggtgcagcaggaagcc
ctggtcaagctcaagcggctgctggcctctcgtggcgtgagccgggatgccttgttctag
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