Herbaspirillum sp. DW155: HBDW_30930
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Entry
HBDW_30930 CDS
T10195
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00020
Citrate cycle (TCA cycle)
hew00190
Oxidative phosphorylation
hew00650
Butanoate metabolism
hew00720
Other carbon fixation pathways
hew01100
Metabolic pathways
hew01110
Biosynthesis of secondary metabolites
hew01120
Microbial metabolism in diverse environments
hew01200
Carbon metabolism
Module
hew_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hew_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hew_M00149
Succinate dehydrogenase, prokaryotes
hew_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HBDW_30930 (sdhA)
00650 Butanoate metabolism
HBDW_30930 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HBDW_30930 (sdhA)
00720 Other carbon fixation pathways
HBDW_30930 (sdhA)
Enzymes [BR:
hew01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HBDW_30930 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
Pyr_redox_3
NAD_binding_7
FKS1_dom1
Motif
Other DBs
NCBI-ProteinID:
BEV16305
LinkDB
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Position
complement(3440401..3442179)
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AA seq
592 aa
AA seq
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MAAIKSAITTRRFDAVIVGAGGSGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWYWHMFDTVKGSDYLGDQDAIEFMCREAPKAVYELEHFGMPFDRNPDGTIY
QRPFGGHTANLGEKPVQRACAAADRTGHALLHTLYQRNVRAKTHFFVEWMALDLIRNEEG
DVLGVVALEMETGEIMMLHAKTTLFATGGAGRIWAASTNAFINTGDGMGMAARAGLPLQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILINSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGVGPHKDHVLLDLRHIGADTIKKRLPSILEIAHKFANVDATKEPIPVVPTIHYQ
MGGIPTNIHGQVVAPKGGSMKEVVQGMYAIGECACVSVHGANRLGTNSLLDLVVFGRAAG
NHIVGTRLQDQSHKPIPAGALDRSLERIAHLESSTGSERVQDVANDIRATMQKYCGVFRT
DALLQEGQKKIMELDERRKHVSFKDKSKVFNTARVEALELDNLIETAKATITSAAARKES
RGAHAHSDYEQRDDVNWLKHTLWFSEGNRLDYKPVNMQPLTVETFKPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcaatcaaatccgccatcactacccgccgctttgatgcggtcatcgtcggcgcc
ggtggctccggcatgcgtgcctcgctgcagctggccgaagctggcctgaatgtcgctgtc
ctgtccaaggtcttcccgacccgctcgcacaccgtggctgcccaaggcggcatcggcgct
tcgctgggcaacatgtccgaagacaactggtactggcacatgttcgataccgtcaagggt
tcggactacctgggcgaccaggatgccatcgaattcatgtgccgcgaggcaccgaaggcc
gtctacgagctggaacactttggcatgcccttcgatcgcaacccggatggcaccatctac
cagcgtccgtttggcggccacaccgccaacctgggtgaaaagccggtgcagcgcgcctgt
gctgcggctgaccgtaccggtcacgccctgctgcacaccctgtaccagcgcaacgtgcgc
gccaagacccacttcttcgtggagtggatggcgctggacctgatccgcaacgaagagggc
gatgtcctcggcgtggtggcgctggaaatggaaaccggcgaaatcatgatgctgcacgcc
aagaccaccctgttcgccaccggcggtgcaggacgtatctgggcggcatcgaccaatgcc
ttcatcaacaccggcgacggcatgggcatggccgcacgtgccggcctgccgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgaa
ggcgtgcgcggcgaaggcggcatcctgatcaacagcaatggcgaacgcttcatggagcgc
tatgcgccgaccctgaaggatctggccccgcgtgacttcgtgtcgcgttcgatggaccag
gaaatcaaggaaggccgcggcgtcggtccccacaaggatcacgtgctgctggatctgcgt
cacatcggtgccgataccatcaagaagcgcctgccctcgattctggaaatcgcccacaag
ttcgccaacgtcgatgcgaccaaggaaccgatcccggtcgtgccgaccatccactaccag
atgggtggtatccccaccaacatccacggccaggtggtcgcgcccaagggcggttcgatg
aaggaagtggtgcagggcatgtacgccatcggcgaatgtgcctgcgtctcggtgcacggc
gccaaccgcctgggtaccaactcgctgctggacctggtggtgttcggccgcgctgccggt
aaccacatcgtcggcacccgcctgcaggaccagagccacaagccgatcccggccggcgcc
ctggaccgctcgctggaacgcatcgcgcacctggaaagcagcaccggttccgagcgcgtg
caggacgtggccaacgacattcgtgccaccatgcagaagtactgcggcgtgttccgtacc
gacgccctgctgcaggaaggccagaagaagatcatggagctggacgagcgccgcaagcac
gtctccttcaaggacaagtccaaggtcttcaacaccgcccgcgtggaagcgctggagctg
gacaacctgatcgaaacggccaaggccaccatcacctcggcagcagctcgcaaggaatcg
cgcggcgcccacgcgcacagcgactacgagcaacgcgacgacgtgaactggctcaagcac
acgctgtggttctccgaggggaatcgtctcgactacaagccggtcaacatgcagccgctg
accgtcgagactttcaaacctaaagcacgtactttctaa
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