Herbaspirillum sp. DW155: HBDW_33710
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Entry
HBDW_33710 CDS
T10195
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hew Herbaspirillum sp. DW155
Pathway
hew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HBDW_33710 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hew03400
]
HBDW_33710 (mutS)
DNA repair and recombination proteins [BR:
hew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HBDW_33710 (mutS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Rad17
Motif
Other DBs
NCBI-ProteinID:
BEV16583
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Position
3744439..3747120
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AA seq
893 aa
AA seq
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MTKDLAAHTPMMQQYLRIKADHPNTLVFYRMGDFYELFFEDAEKASRLMGVTLTQRGSSN
GNPIKMAGVPFHSVEQYLARLIKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDS
DLLPEKAERCLLAMQLLPSKSRKQMQVGLAWLSMASGALKMMEFTVEAHLLDGRVKQELE
RISAAEVLVADGQLEQCEPLLPNRAVTVPDWHFDQPSSEKALLDQLGVATLHGFGADGLG
PAICAAGALLRYAQSTQGRGLQHVRTLTVESENEFIGLDAATRRNLELTETIRAQDANAL
APTLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALMRTDACSGLSATLAAV
PDIERITTRIALLSARPRDLAGLRSGLQQLGSLRAYVEMCARDAEAPLLGQLHEDLATPV
ECLDLLERAIMLEPAAMVRDGGVIARGYDAELDELRGLSENAGQYLLELEARERERTGIA
NLRVEYNKVHGFYIEVTHGQTDKVPEDYRRRQTLKNAERYIIPELKAFEDKALSAQERSL
SREKFLYEQLLNDMGVHIVRLQAIAHALAQLDTLVALADHAVRNNWCAPQLVAEPCIQIE
QGRHPVVENQIERFIANDCQLAAERKLLLITGPNMGGKSTFMRQVALITLLAYVGSFVPA
TSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLVLMDEVGRGTSTF
DGLALAWAIAKHLIDVTRSFTLFATHYFELTQLPDIHPTAANVHLSAVEHKDSIVFLHAV
QSGPASQSYGLQVAQLAGVPAPVIRAARKHLSALESQSMQATPQFDLFSSASFTEPAAEP
EETHDERNPASAVEPDPLAQALLHSLDGIDPDALTPRQALEALYQLKALSRGQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacctcgccgcccacacgccgatgatgcagcagtatctgcgcatcaaagcg
gaccaccccaacacgctggtgttctaccgcatgggcgatttctacgaactgtttttcgag
gatgccgaaaaggcctcgcgcctgatgggcgtgaccctcacccagcgcggctcctccaac
ggcaacccgatcaagatggcgggcgtgcccttccactcggtggagcaatacctggcgcgc
ctgatcaagctgggcgagtcggtggcgatctgcgaacagatcggcgacccggccaccagc
aaggggccggtcgagcgcaaggtggtgcgggtggtcacgcccggcaccctgaccgattcc
gacctcttgcccgaaaaggccgagcgctgcctgctggccatgcaactgctgccctccaag
tcgcgcaagcagatgcaggtcggcctggcctggctgtccatggccagcggcgcgctgaag
atgatggaattcacggtcgaggcgcatttgctggatggccgcgtcaaacaggaactggaa
cgcatctccgccgccgaggtgctggtggccgatggccagctggagcagtgcgagccactg
ctgccgaaccgcgccgtgacggtgccggactggcatttcgaccagcccagcagcgagaag
gccctgctcgatcagctgggcgtagccaccctgcacggcttcggtgccgacggcctgggc
ccggccatctgcgccgccggcgccctgctgcgctatgcgcaatcgacccagggacgcggc
ctgcagcacgtgcgcacgctcacggtcgaatccgagaacgaattcatcggcctggacgcc
gccacccgacgcaacctggaattgaccgaaaccatccgcgcgcaggatgccaatgcgctg
gcccccacgctcttctccacgctggaccactgccgtaccgcgatgggttcgcgcctgctg
cgccactggctgcatcacgccctgcgcgaccagcaggtggcgcgcgcacgccacgccgcc
atcaatgcgctcatgcgcacggacgcctgctcgggcctgtcggctacgctggcggccgtg
cccgacatcgaacgcatcactacccgcatcgccctgctgtcggcgcgtccgcgcgatctg
gcgggattgcgtagcggcctgcagcagttgggttcattgcgtgcctacgtggagatgtgc
gcccgcgacgccgaagcgccgctgctgggccagctgcacgaagacctggccacgcccgtg
gaatgccttgacctgctggaacgcgccatcatgctggaacccgccgccatggtgcgcgac
ggcggcgtgatcgcgcgcggctatgatgccgagctggatgaactgcgcggcctctcggaa
aacgccggccagtacctgctggaactggaagcgcgcgagcgtgaacgcaccggcatcgcc
aacctgcgggtggaatacaacaaggtccacggcttctacatcgaagtcacccacggccag
accgacaaggtgccggaagactatcgccgccgccagaccctcaagaacgccgaacgctac
atcatccccgaactgaaggccttcgaggacaaggcgctctccgcgcaggaacgttcactg
tcgcgcgagaagttcctctatgagcagcttctcaatgacatgggcgttcatatcgtgcgc
ctgcaagccatcgcccatgccctggcccagctcgataccctggtcgccctggccgaccat
gccgtgcgcaacaactggtgcgcgccgcaactggtggccgagccctgcatccagatcgag
caaggccgccatccggtggtggaaaaccagatcgagcgcttcatcgccaacgattgccag
ctcgccgccgaacgcaagctgctcctgatcaccggccccaacatgggcggtaagtcgacc
ttcatgcgccaggtggcgctgatcacgctgctggcctacgtgggcagcttcgtgcccgcc
accagcgccgtgatcgggccgatcgaccgcatcttcacccggatcggcgcggccgatgac
ctggccggggggcgctccaccttcatggtggagatgaccgaatcggcctccatcctcaac
aacgccaccgaacattcgctggtgctgatggatgaggtcgggcgcggcacctcgacgttc
gacgggctggcgctggcctgggcgattgccaagcacctcatcgatgtgacgcgcagcttc
accctctttgcgacccactacttcgaactgacgcagttgccagatatccacccgaccgca
gccaacgtgcatctctcggcggtggagcacaaggacagcatcgtcttcctgcacgcggtg
cagagcggccccgcttcgcagagctacgggctgcaggtggcacagctggccggggtgccg
gcgccggtcatccgggccgcgcgcaagcatctgtcggcgctggaaagccagtccatgcaa
gcgaccccgcagttcgacctgttcagctccgcatccttcacggaaccggcagcggaacct
gaagaaacgcacgatgaacgcaaccccgcgagcgcggtcgaacccgatccgctggcccag
gcgctgctgcactcgctggacggcatcgatccggatgccctcacgccgcgccaggcgctg
gaagcgctgtaccagctcaaggccctgagccggggacaataa
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