Herbaspirillum sp. DW155: HBDW_34820
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Entry
HBDW_34820 CDS
T10195
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_34820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_34820
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HBDW_34820
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_21
AAA_22
nSTAND_NTPase5
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BEV16694
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Position
3865120..3866307
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AA seq
395 aa
AA seq
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MGLEKAGTDAAIQMMHHHLIICRKFTRYKRFSMTHAPVYVRFKGIQKSYDDEHFVVRDLN
LDIYKGEFLTLLGPSGSGKTTSLMMLAGFEQPSSGEILVNNKPIHTLPPHQRNIGMVFQN
YALFPHMTVAQNLAFPLSVRRLSHSDVKEKVARALDMVRLAHVAERYPAQLSGGQQQRIA
LARALVFEPKLVLMDEPLGALDKQLREQMQLEIRRLHRDLGLTVVFVTHDQSEALTMSDR
VAVFNDGVIQQIDAPQALYERPSNAFVAQFVGENNVLKGVVERRETDWSDVRLPSGSLLS
TRTTPATPKLGEQALVSVRPERVEINTSALDAQLPARIVQLIYLGDHVRAQLALDDGGEF
AARIPASQMRSEWAAGTNVTVSWRHQDASALDCNS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgggtttggaaaaggctggcacggatgctgctatccagatgatgcatcatcatctgata
atttgtcgaaagttcacccgttacaagaggttttcaatgactcacgctccggtatacgta
cgtttcaagggaatccagaaaagctatgacgacgagcatttcgtggttcgtgatttgaat
ctggatatctataagggcgagtttctgaccctgctcggcccctcggggtcggggaagacc
accagcctgatgatgctggctggcttcgagcagccctcatccggcgagattttggtgaac
aacaagccgatacacacgctgccgccgcaccagcgaaacatcggaatggttttccagaac
tacgcgcttttcccccacatgactgtggcgcagaacttggctttcccactgagtgtgcga
cgcctgtcgcacagcgacgtgaaagagaaagtggcgcgggcgctggacatggtgcgtttg
gctcatgtggccgagcgctatcccgcgcagctgtcaggtggtcagcagcaacgcattgcg
ctggccagggcgttggttttcgagcccaagttggtgctgatggatgaacccctgggagcg
ctcgacaagcaattgcgcgagcagatgcagctggagattcgccgcctgcaccgcgatctg
ggcctgacggtggtattcgtcacacatgatcaatcggaggcgctgaccatgtcggaccgt
gtggccgtcttcaatgacggcgtgattcagcaaattgacgcccctcaggcgctctacgag
cggccgtccaatgcattcgtcgcgcagttcgttggcgagaacaatgtgctcaaaggtgtg
gtggagcgtcgcgaaaccgattggtccgacgtgcgccttccgagcggctcgttgcttagc
acccgtactacgccagctacgcccaagctcggagagcaggccctggtgtcggtacgccca
gagcgggtcgagatcaatacctctgcgttggacgcccagttgccggcccgcatcgtccag
ctgatttacttgggtgaccacgtgcgtgctcagttggccttggatgatggtggtgagttc
gctgccaggatcccagcgtcgcagatgcgctccgaatgggccgctggtaccaacgtgacg
gtgtcctggcgccaccaggatgccagtgcactcgactgtaattcctga
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