Herbaspirillum sp. DW155: HBDW_35120
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Entry
HBDW_35120 CDS
T10195
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
hew03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_35120
03070 Bacterial secretion system
HBDW_35120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_35120
02044 Secretion system [BR:
hew02044
]
HBDW_35120
Transporters [BR:
hew02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HBDW_35120
Secretion system [BR:
hew02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HBDW_35120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
SbcC_Walker_B
DUF87
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BEV16724
LinkDB
All DBs
Position
complement(3895585..3897444)
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AA seq
619 aa
AA seq
DB search
MPDRPRILSHEAFRGRLPLQLIELDALRDTAEKDKNFDLSELMRPLLERRSVAAEILFAS
LALQIFALAVPLFSQMIIDKVLNHRNLASLHVLGVAMIVLIGFEATFSILRARLLAYVSS
RIDALLGMRVVRHLLRLPLRYFESRPMGVLLSQTREMEPIRQILAGSSFSGLVDLIFTLV
FVAVMFSYSATLTVVVLLAVPVLIVFSLVVRPLMRRTLARKHEMASRASSVLLELVSGIH
AIKALAIENAMQSRWQQALSEQVAATREASGLSSMNAAFNMLVQRAVVLAVLWLGAHQVL
DGQLTVGQVIAFQMLALRFIHPVTHVVQVWQELQQLSLSSDELGQIMNVPPESDAGSART
ATDEVRGDVQLTDLVFRYSPQAPVVLDGLSLVAAPGDIIGIVGRSGGGKSTLAKLLHGLY
RPTQGQILVDGIDMDHHDPLTLRAQISVVPQDIFLFSGTIGENIAISDGDTNLEAIVAAA
ELADAHAFIMALPQGYDTVVGERGGILLSGGQRQKIAIARAVYARPRILILDEATSALDH
ESERRVQNNLRHAFPHCTVFVIAHRLSTVRHASKILVLDQGRFVEAGKHEELMQRDGLYR
RLYTMDGQQDQEGKRAAGR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgccggatcgtccgcgcatcctcagtcatgaggcgttccggggccgtctgccgctgcag
ctgattgaactggatgccctgcgggatacagcagaaaaggacaagaactttgacctcagt
gaattgatgcggcccttgctggagagacgttccgtcgcagcggaaatcctcttcgcatca
ctggcgttgcagatatttgcattagccgttccgctgttcagccagatgatcattgacaag
gtactcaatcaccgcaacctggccagcttgcatgtgctgggtgtcgccatgatcgtgctg
atcggcttcgaagcaacgttctcgatactgcgcgcgcgtctgctggcctatgtctcatcg
cgtatcgacgccttgctcggcatgcgtgtggtaagacatcttctccgtctgccgctgcgg
tatttcgaatcgaggccgatgggtgtcctgctttctcaaaccagagagatggaaccgata
cgccagatcctggcgggctcgtccttctccggtctggtcgatctgatcttcacgttggtg
ttcgtggcggtcatgttcagctatagcgccactctcacggtggtggtgctgctggcggtt
cctgtgctgatcgttttttcactggtggtacgcccactgatgcgccgcacactggcccgc
aagcatgagatggcttccagggcgagtagtgtcttgctcgaactggtttctggcatccac
gccatcaaggccctcgccattgaaaatgccatgcagtcgcgttggcaacaggcattgtcc
gaacaggttgcggcgacccgggaggccagtggcttgagcagcatgaatgcggctttcaat
atgttggtacagcgcgcagtggtattagcggtcttgtggctgggtgctcatcaggtgttg
gatggtcaactgacggtgggacaggtgatcgcattccagatgctggccttgcgcttcatc
cacccggtgactcatgtggtccaggtgtggcaggagctgcagcaattgagcctgtccagc
gatgaactgggccagatcatgaatgtcccgcctgagtcggacgcgggtagtgcccggacc
gcgactgatgaggtgagaggggatgtgcagcttaccgacctggtgtttcggtattctccg
caagcgccggtcgtccttgatggcctctccctggtggcggcgccgggcgacatcatcggc
atcgtcgggcgcagcggaggcggcaagagtacactggccaagctgctgcatggattgtat
cgacccacgcaaggacagatactggtcgatggcatcgatatggatcaccatgatccgctc
accttgcgcgcccagatcagcgtggtgccgcaagacatcttcctcttcagcggcaccatc
ggcgagaacatcgccatcagcgacggcgacacgaatcttgaggccatcgtggccgcagcc
gaactggcggacgcccacgccttcatcatggccctgcctcaggggtatgacacggttgtc
ggtgagcgcggcgggattttgctctcgggtggccagcgccagaagatcgccattgccagg
gccgtgtatgcgcggccccgcatactcatcctcgatgaggccaccagcgccctcgaccac
gaatctgaacgccgcgtgcagaacaatctgcgccatgcctttccccattgcacggtgttc
gtcatcgcgcaccggctgagcacggtaaggcatgccagcaagatcctggtgctggatcag
ggacggtttgtcgaggcgggcaagcacgaggaactcatgcagcgggacggtttgtatcgt
cgtctctacaccatggatgggcagcaagatcaggagggcaagcgtgcggccggccgttga
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