Herbaspirillum sp. DW155: HBDW_38440
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Entry
HBDW_38440 CDS
T10195
Name
(GenBank) recombinase RecA
KO
K08482
circadian clock protein KaiC
Organism
hew Herbaspirillum sp. DW155
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
HBDW_38440
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
NACHT
PAXNEB
RecA
nSTAND3
AAA_22
DnaB_C
NPHP3_N
AAA_16
Rad51
AAA_19
AAA_30
MEDS
DUF7125
SLFN-g3_helicase
AAA_18
CbiA
AAA_33
ATPase_2
NB-ARC
SRP54
Motif
Other DBs
NCBI-ProteinID:
BEV17056
LinkDB
All DBs
Position
complement(4277544..4279022)
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AA seq
492 aa
AA seq
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MNHHPPFPPAAAAVTTSRPSRISLLSTGIAGFDEILGGGLPAGSLYLIQGLAGSGKTTLA
SQVGFAQARSGNKVMLLTLIAESHAKMLNHVSNFDFFDESLVGGQMQMLSGYGALASEGL
RGLLRLISAELNRHRPAMLIIDGFRSVRDSGPSDLNLSEFMHSLNSLVFTMHCTTLLLSP
VEGNMPESENTLVDGVIELSQYESGMQLVREIKVFKLRGANHLLGKHVFEINQSGVEIFP
RFEATATRAGKVPGTSDRYVSVGIPSWDKCIGGGVVSGSLTCLLGSPGVGKTLMGLHFIE
QGLKDGQQCLILGFYESPERLLAKARKAGMQLDEHIDSGALQMMWQLPLEMLCDDLAKRM
LDNIARRGVTRLLIDGVDGLRSIVVQQQRMRPFLVALTNELRARGVTTFITEQLPYFRES
RPQVDPSSSQLYENMMLLEYVVKDDVNRRQISVMKLRENGYDGASRLMNISDAGIEIDGL
VTPLPAPLADGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatcacccgccgttccctcctgctgctgctgccgtcacgacctcgcggcccagc
cgcatctcgctgctcagtaccggcattgccggtttcgacgagatcctcggtggtggcctg
ccggccggcagcctctatctgatccaggggctggccggcagcggcaagaccacgctggcc
tcgcaggtggggtttgcccaggcgcgcagtggcaacaaggtgatgttgttgacgctcatt
gccgaatcccacgccaagatgctcaatcacgtgagcaattttgacttcttcgacgagagc
ctggtgggcggccagatgcagatgctcagcggctatggcgcgctggccagcgagggcctg
cgcggcctgctgcgcctgatcagcgccgaactgaaccgccatcgcccggccatgctcatc
atcgacggtttccgttcggtgcgcgattcggggccctcggacctgaacctgtcggaattc
atgcattccctgaactcgctggtgttcaccatgcattgcaccaccctgctgctctcgccg
gtggaaggcaacatgcccgagtcggaaaacaccctggtcgatggcgtcatcgaactgagc
cagtacgaatccggcatgcagctggtgcgcgagatcaaggtcttcaagctgcgcggcgcc
aaccacctgctgggcaagcacgtcttcgagatcaaccagagcggcgtggagatattcccg
cgcttcgaagccaccgccacccgcgccggcaaggtgccgggcacctcggaccgttatgtc
agcgtgggcatcccttcctgggacaagtgcatcggcggtggcgtggtcagcggttcgctg
acctgtctcttgggcagtcccggcgtgggcaagacgctcatgggactgcacttcatcgaa
cagggactgaaggacggccagcaatgcctgatcctgggcttctacgaatcgcccgaacgc
ctgctggccaaggcgcgcaaggccggcatgcagctcgatgaacatatcgacagcggtgcc
ctgcagatgatgtggcagctgccgctggaaatgctgtgcgacgacctggccaagcgcatg
ctggacaacatcgcccggcgcggcgtgacgcgcctgttgatcgatggcgtggacggcctg
cgcagcatcgtggtgcagcagcagcgcatgcggcccttcctggtggcgctgaccaatgag
ctgcgcgcgcgcggcgtgaccaccttcatcaccgagcaattgccgtatttccgcgaatcg
cggccccaggtcgatcccagttcctcgcagctgtatgaaaacatgatgctgctggaatac
gtggtcaaggatgacgtcaaccgccgtcagatttcggtgatgaagctgcgcgaaaacggc
tacgacggtgccagccgtctgatgaacatttccgacgccggcatcgagatcgatggcctg
gtcacccctcttcccgcgccgcttgcggatggacgctga
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