Herbaspirillum sp. DW155: HBDW_39160
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Entry
HBDW_39160 CDS
T10195
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HBDW_39160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hew03400
]
HBDW_39160
Enzymes [BR:
hew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HBDW_39160
DNA repair and recombination proteins [BR:
hew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HBDW_39160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_coatGP8
Motif
Other DBs
NCBI-ProteinID:
BEV17128
LinkDB
All DBs
Position
complement(4361773..4362036)
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AA seq
87 aa
AA seq
DB search
MPRTSAAAATADLPASFEQAMEELEQLVARMEAGELPLEASVAAYKRGSELVRFCAGQLD
KVDSQVKLLEGDMLKPFSAADAAGGDE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaacctctgccgctgctgccactgccgacttgcccgcttccttcgagcaggcc
atggaggaactggaacagctcgtcgcccgcatggaagccggtgaactgccgctggaagcg
tcggtggccgcctacaagcgcggctccgaactggtcaggttctgcgccggccagctcgac
aaggtggacagccaggtcaagctgctcgaaggcgacatgctcaagcccttcagcgcagcc
gatgctgccggcggggacgagtga
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