Herbaspirillum sp. DW155: HBDW_39560
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Entry
HBDW_39560 CDS
T10195
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00061
Fatty acid biosynthesis
hew00071
Fatty acid degradation
hew01100
Metabolic pathways
hew01212
Fatty acid metabolism
hew02024
Quorum sensing
hew04146
Peroxisome
Module
hew_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HBDW_39560
00071 Fatty acid degradation
HBDW_39560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HBDW_39560
09145 Cellular community - prokaryotes
02024 Quorum sensing
HBDW_39560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hew01004
]
HBDW_39560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hew04147
]
HBDW_39560
Enzymes [BR:
hew01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HBDW_39560
Lipid biosynthesis proteins [BR:
hew01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HBDW_39560
Exosome [BR:
hew04147
]
Exosomal proteins
Exosomal proteins of breast milk
HBDW_39560
Exosomal proteins of breast cancer cells
HBDW_39560
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BEV17168
LinkDB
All DBs
Position
complement(4399143..4400843)
Genome browser
AA seq
566 aa
AA seq
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MDRFWLASYPAGVPADIDPSPYGSLVQMIDEAFVKHADRNAYVCMGKYLRYRELDAMSRA
MGAWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG
AEAIFVLENFACTLQKVVANTKVRHIVVASMGELLGTLKGAIVNLVVRHVKKMVPAWSLP
HAVSFSQALAQGEGKTLQPVLLTPDDFAFLQYTGGTTGVAKGAVLTHRNLIANVLQAEAW
LNPALKAGKPIDQLVFVCALPLYHIFALTVCNLLGTREGALNLLIPNPRDIPGFVKELAK
YKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKLTGCPIIEGY
GLSETSPIASANPCTIDEYTGTIGLPLSSTEIAILDDDGNPVPLGQPGEIAIRGPQVMPG
YWQRPDETAKVMTPDGFFKTGDVGIMDARGYTRIVDRKKDMILVSGFNVYPNEIEGVVAQ
HPAVLECACVGVPDEHTGEAVKLFVVRKDKSLTTEQLMAYCKEQFTGYKKPKYIEFRDEL
PKTNVGKILRRELRDDPAKAQQKQAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacagattctggcttgcatcgtatcccgcaggcgttcccgctgacatcgaccccagc
ccttacggatcgctggtgcagatgatcgatgaagcattcgtcaagcatgccgaccgcaat
gcctacgtctgcatgggcaagtatctccgctatcgcgaactggatgccatgtcgcgcgcc
atgggggcgtggctgcaagggctgggcctgcagaagggcgcacgcgtggcgatcatgatg
cccaacgtgctgcagtatccgatcgccatcgctgccatcctgcgggccggctatacggtg
gtcaacgtcaacccgctctacaccgcccgcgagctggagcaccagctgaaggattccggt
gccgaggccatcttcgtgctggagaactttgcctgcacactgcagaaggtggtggccaac
accaaggtcaggcacatcgtggtggccagcatgggcgagctgctcggcacgctcaagggc
gccatcgtcaatctggtggtgcgccacgtcaagaagatggtgccggcctggtcgcttccc
catgccgtctcgttcagtcaagcgctcgcgcagggcgagggcaagaccttgcagccggtg
ctgctgacgccggatgatttcgctttcctgcaatacaccggcggcacgacgggcgtggcc
aagggtgccgtgctgacccaccgcaacctgattgccaacgtgctgcaggccgaagcgtgg
ctgaacccggcgctgaaggccggcaagcccatcgaccagctggtgttcgtctgtgcgctg
ccgctgtatcacatctttgcgctgaccgtctgcaatctgctgggcacgcgcgaaggtgcg
ctgaacctgctgatccccaatccgcgcgacatccccggtttcgtcaaggaactggccaag
tacaaggtcaacaccttcccggcggtcaatacgctctacaacgcgctgctcaacaacgcc
gattttgccaggctggatttctccggctatcgctgctgcgtgggtgggggcatggcagtg
cagaagagcgtggccgacaagtggaagaagctgaccggctgtcccatcatcgaaggctac
ggtttgtcggaaacctcgcccatcgccagcgcgaacccctgcaccatcgatgaatacacc
ggcaccatcggcctgccgttgtcctccaccgagatcgccatcctcgatgacgacggcaat
ccggttccgttgggccagccgggcgagatcgccattcgcggtccgcaggtgatgccgggt
tactggcagcgtccggacgagaccgccaaggtcatgacgccggatggcttcttcaagacc
ggcgacgtcggcatcatggatgcgcgcggctataccaggatcgtcgaccgcaagaaggac
atgatcctggtctccggtttcaacgtctatcccaatgaaatcgaaggcgtggtggcgcag
catccggcagtgctggagtgcgcctgtgtaggcgtgcctgatgaacataccggcgaagcg
gtcaaactcttcgtggtgcgcaaggacaagtcgctgacgaccgagcagctgatggcctac
tgcaaggaacagtttaccggctacaagaagccgaagtacatcgagttccgcgatgaactg
cccaagaccaacgtgggcaagatcctgcgccgggagttgcgggatgatcctgcgaaggcg
cagcagaaacaggcggcgtga
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