Herbaspirillum sp. DW155: HBDW_40560 Help Entry HBDW_40560        CDS       T10195                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism hew  Herbaspirillum sp. DW155 Pathway hew02020   Two-component system hew02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hew00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     HBDW_40560  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     HBDW_40560  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hew03021]     HBDW_40560 Transcription machinery [BR:hew03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      HBDW_40560 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 Xre-like-HTH HTH_IclR DUF4363 Motif Other DBs NCBI-ProteinID:  BEV17268 LinkDB All DBs Position 4524551..4526041 Genome browser AA seq 496 aa AA seqDB search MKQSLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEQILSDNPLLERLDDALDNSVRL LADGAVSSSPSSGVADTSGEGNAEPAPAAADGDSSFDYQDNNPENGVTGEADWSFDDVAR SGKSPDDDDARPQLEAHELTLREHLLEQIRVTARTQRDRALLELLTDALDESGYLEEPLE DILARLPEELGIDMEELSISLKLLQSLDPAGVGARSAGECLALQIRRLPKIPFVTRKLAL RIVEDYLPLFAQRDFNKIKKALDCDDEDLREAQAVIRQCRPHPGADFARDASDYVVPDVI VKQTKNGWQVMLNHEVMPKLRVNAMYASALKQAKGEGSLSSQLQEAKWLIKNMRQRFDTI LRVAQAIVERQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELK YFFGSHVATETGGEASSTAIRALIKQLIGAENPQTPLSDSKIADMLAEQGMVVARRTVAK YREVLKIPPVNLRKSL NT seq 1491 nt NT seq  +upstreamnt  +downstreamnt atgaaacagtctctccagttacgtacctcgcagcacctcgcattgacgccgcaactgcag cagtcgatcagactgttgcaactgtcgacgctggaactgcaccaggaactggaacagatc ctctcggacaatcccttgctggagcggctcgacgatgcgctcgacaattcggtgcgcctg ctggccgatggcgcggtctccagctcgccctccagcggcgtagccgacacctctggcgaa ggcaatgccgagccggcaccggcagccgccgatggcgattccagttttgactaccaggac aacaatcccgagaacggcgtcaccggtgaggccgactggagcttcgatgatgtggcccgc agcggcaagtcgcctgacgacgacgacgcccgcccgcaactcgaagcccacgaactgacc ctgcgcgagcacctactggaacagatccgcgtgaccgcacgcacccagcgcgaccgcgcc ctgctggagttgctcaccgatgcgctcgacgagagcggctatctcgaagagccgctggaa gacatcctcgcgcgcctgcccgaagaactgggcatcgacatggaagagctgtcgatttcc ctgaagctgctgcagagcctggacccggccggcgtgggtgcgcgcagtgccggtgagtgc ctggccctgcagatccgtcgcctgcccaagatccccttcgtcacgcgcaagctggcgctg cgcatcgtggaagattacctgccgctgttcgcgcagcgcgacttcaacaagatcaagaaa gccctcgattgcgatgacgaagacctgcgcgaagcccaggccgtgatccgccagtgccgt ccgcatccgggcgccgatttcgcgcgcgatgcctcggactatgtggtgccggacgtgatt gtcaaacaaacaaagaacggctggcaggtcatgctcaaccatgaggtcatgcccaagctg cgtgtcaatgcgatgtatgccagcgcgctgaagcaggccaagggagaaggatcgctgtcg tcgcagctgcaggaagccaagtggctcatcaagaatatgcgccagcgtttcgacacgatt ttgcgtgtcgcacaggctattgtggaacgtcaaagaaacttcttttcacatggggcagtg gccatgcgcccccttgtgctgcgtgaaattgctgatacactgggtctacacgagagcacc atctctcgcgtgacaactcagaaatacatgctcacgccgcacggcatgtttgagttgaag tacttcttcggtagccacgtcgcgactgaaaccgggggcgaagcctcctccaccgcgata cgggcgctgatcaaacagttgataggagccgagaacccgcagaccccattatccgatagc aagattgcggatatgctggcagaacaaggcatggtggtcgcgcgacgcacagtcgccaaa taccgcgaagtgttgaagattccgccggtcaatctccgcaagtccctctga

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