Herbaspirillum sp. DW155: HBDW_40750
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Entry
HBDW_40750 CDS
T10195
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
hew Herbaspirillum sp. DW155
Pathway
hew00362
Benzoate degradation
hew00624
Polycyclic aromatic hydrocarbon degradation
hew01100
Metabolic pathways
hew01120
Microbial metabolism in diverse environments
hew01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HBDW_40750 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
HBDW_40750 (pcaH)
Enzymes [BR:
hew01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
HBDW_40750 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
BEV17287
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Position
4542532..4543224
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AA seq
230 aa
AA seq
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MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDETATGTNLFASPKLILPHDMDLTK
QGKGEPLGEKIVVTGRVLDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG
KMLTDDNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA
YDPIFQSIPDEAARQRLISRFSMEETVDDKMLGYEFDIVLRGRNATPMGI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgatgccatcgaacccggtgtctatccggaactgatctatcccccttacaag
tccaccgtcaagcgcggccccacgcaagcaccgctgcgcgtgcgcgacgagaccgccacc
ggcaccaacctgttcgcctcgcccaagctgatcctgccgcacgacatggacctgaccaag
cagggcaagggcgagccgctgggcgagaagatcgtcgtcaccggccgcgtgctcgatgaa
gacggcaagccggtgcgcaactccctgctggaagtctggcaatgcaatgccgcgggccgc
tacttccacaagaaggaccagcacgatgcgccgctggaccccaacttcaccggcttcggc
aagatgctcaccgatgacaatggccgttatcgctttgtctcgatcaagcccggcccgtat
ccctggggcaaccaccacaaggcctggcgtccggcgcacatccacttctcgctgttcggc
aatgtctatgcacagcgactggtgacgcagatgtacttccccaacgatccgctgttcgcc
tacgacccgatcttccagagcattcctgacgaagccgcgcgccagcgcctgatctcgcgc
ttctcgatggaagagacggtggacgacaagatgctgggctatgaattcgatatcgtcctg
cgcggccgcaacgccacgcccatgggcatctga
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