KEGG   Herbaspirillum sp. DW155: HBDW_44330
Entry
HBDW_44330        CDS       T10195                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hew  Herbaspirillum sp. DW155
Pathway
hew00300  Lysine biosynthesis
hew00470  D-Amino acid metabolism
hew01100  Metabolic pathways
hew01110  Biosynthesis of secondary metabolites
hew01120  Microbial metabolism in diverse environments
hew01230  Biosynthesis of amino acids
Module
hew_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hew00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HBDW_44330 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HBDW_44330 (dapF)
Enzymes [BR:hew01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HBDW_44330 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF DUF8598
Other DBs
NCBI-ProteinID: BEV17645
LinkDB
Position
4907486..4908349
AA seq 287 aa
MKIKFTKMHGAGNDFVVLDAVTQAISLTPAQWQFIADRRFGIGADQMLVVEKAQGAGVDF
RYRIYNADGGEVEQCGNGARAFVRFVTEKGLTDKRAIRVETMSGVIEPRLEEDGQITVDM
GAPILTPADVPFDSRNLQHRSQAEDTLWPLDVAGKTTWISVVSMGNPHAVQVVQDSEAAP
VLVDGPLIERHERFPKRVNAGFMQVVDRHHINLRVYERGAGETLACGTGACAAVVAGIRR
GLLDSPVAVQTHGGVLNIAWAGPGEPVMMTGPAVTVFEGEIELPDSL
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaaatcaaatttaccaagatgcacggcgccggcaacgatttcgtcgtgctcgatgcc
gtcacccaggccatttcgctcacccccgcccagtggcagttcatcgccgatcgccgcttc
ggcatcggtgccgaccagatgctggtggtggagaaggcgcaaggcgccggtgtggatttc
cgttatcgcatctacaacgctgatggcggagaagtcgaacaatgcggcaatggtgcgcgc
gccttcgtgcgcttcgtcaccgaaaagggcctgaccgacaagcgcgccatccgcgtggaa
accatgtccggcgtgatcgagccgcgcctggaagaggatggccagatcaccgtggacatg
ggcgcgccgattctcacgcccgccgacgtccccttcgacagccgcaatctgcagcaccgc
agccaggccgaagacacgctctggccgctggatgtggccggcaagaccacgtggatctcg
gtagtgtcgatgggcaacccgcatgcggtacaggtggtgcaagacagcgaagccgccccg
gtactggtggacggtccgttgatcgagcgccatgaacgcttccccaagcgcgtcaatgcc
ggcttcatgcaggtggtagaccgccaccacatcaatctgcgcgtctatgagcgtggcgcg
ggcgagaccctggcctgcggcaccggggcctgtgcggcggtggtggcgggtatccgccgt
ggcttgctggattcgccggtggcggtccagacccacggcggcgtgctcaacatcgcctgg
gccgggccgggtgaaccggtgatgatgaccggaccggcggtcaccgtgtttgaaggcgaa
atcgaactgcctgattcgctctga

DBGET integrated database retrieval system