Herbaspirillum sp. DW155: HBDW_46950
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Entry
HBDW_46950 CDS
T10195
Name
(GenBank) carbohydrate ABC transporter permease
KO
K10119
raffinose/stachyose/melibiose transport system permease protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_46950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_46950
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
HBDW_46950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF2427
Motif
Other DBs
NCBI-ProteinID:
BEV17907
LinkDB
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Position
5195977..5196897
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AA seq
306 aa
AA seq
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MLAPSPVSASSASSTSATIPTTMRKPTLIQRSFGQAGRLWVHAVLCLYAVIALFPIALIL
INSLKTRNAIFEGPMALPTAETLTFAGFQKVLAGTHFLLYFGNSLAVTLAALLLIVLFGA
MAAWALTEYRFFGNRALNFFIAIGIMIPIRLGTVSILQLVVALDLINTRTALVLVYTAQG
LPLAVMILSEFMRQIPGELKDAARCDGVGELSIFFRVILPLLRPAIATVAVFTMIPAWND
LWFPLILAPGEDTRTVTLGVQQFIGQYATDWNSVLAALSMAVIPVLLLYVAFSRQLIRGL
TSGAVK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctggccccttcacccgtatctgcttcctccgcttcttccacttctgcaaccatcccg
accaccatgcgcaaacccacgctgatccaacgcagcttcggccaggcgggccgtctctgg
gtgcatgcggtgctgtgcctgtatgcggtgatcgcgctgtttccgattgcgctcatcctc
atcaattcgctcaagacccgcaatgccatcttcgaaggcccgatggccctgcccacggcc
gagacactgaccttcgccggtttccagaaggtgctggcgggcacgcacttcctgctctac
ttcggcaacagcctggccgtgacactggccgccctgctgctgattgtgctcttcggtgcg
atggcggcctgggcgctgaccgagtaccgtttcttcggcaaccgcgcgctgaacttcttc
atcgccatcggcatcatgatcccgatccggttgggcacggtctcgatcctgcaactggtg
gtggcgctggacctcatcaatacccgcaccgcactggttctggtctatacggcgcaaggg
ctgccgctggcggtgatgatcctctccgaattcatgcgccagatcccgggcgagttgaag
gatgcggcgcgctgcgatggcgtgggcgaactcagcatcttcttccgcgtgatcctgccg
ctgctgcgtccggccattgccaccgtggccgtgttcacgatgattccggcctggaacgac
ctgtggttcccgctcatcctcgcccccggtgaagacacacgcaccgtcacgctgggcgtg
cagcagttcatcgggcaatacgccaccgactggaattcggtactggcggcgctgtcgatg
gcggtcattccggtgctgctgctgtacgtggccttctcgcgccagctcatccgcggcctc
acctcaggcgcggtcaaataa
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