Herbaspirillum sp. DW155: HBDW_46960
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Entry
HBDW_46960 CDS
T10195
Symbol
ugpC
Name
(GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
KO
K10235
alpha-glucoside transport system ATP-binding protein
Organism
hew Herbaspirillum sp. DW155
Pathway
hew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBDW_46960 (ugpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hew02000
]
HBDW_46960 (ugpC)
Transporters [BR:
hew02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Alpha-glucoside transporter
HBDW_46960 (ugpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
OB_MalK
TOBE
AAA_21
nSTAND1
RsgA_GTPase
ORC-CDC6-like
SMC_N
AAA_22
AAA_16
AAA_25
AAA_29
Rad17
nSTAND3
AAA_33
NACHT
AAA_28
Adeno_IVa2
AAA
bpMoxR
AAA_5
MMR_HSR1
AAA_23
ATPase_2
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BEV17908
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Position
5196913..5198046
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AA seq
377 aa
AA seq
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MAHVNIKQLRKTYDGRADVLAGLNLDIRDGEFCVLVGPSGCGKSTLLRMLCGLEEISGGE
LAIGGEVVNHLPPAERGIAMVFQSYALYPHMNVYKNMAFGLKVAGSSKSEIDTRIRHAAA
ILKIDHLLQRLPRELSGGQRQRVAIGRAIVRQPRLFLFDEPLSNLDAALRVQTRLEIAKL
HRQLAATIVYVTHDQVEAMTLGDKIVVMHEGRIQQAGTPLELYQQPQNLFVAGFIGSPKM
NFFPGVVTRCDDSGVQVEITGGLRLLADVDPQGVTTGAAVTLGLRAEQIREGLGDGQPLR
GVVNLVEHLGEANFLYVTLEGGHDIVVRGDGNRSVHIGEQLALSVQSHAFHLFDAQGQAL
RRRNPGNLQAARRLGQD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgtcaacatcaagcaattgcgcaagacttacgatggccgcgccgatgtgctg
gccgggctcaacctcgatatccgcgatggcgaattttgcgtgctggtcgggccttccggc
tgcggcaagtcgaccctgctgcgcatgctgtgcgggctggaagagatcagcggcggagaa
ctggccatcggtggcgaagtggtcaaccatctgccaccggccgagcggggcatcgccatg
gtgttccagagctatgcgctgtatccgcacatgaacgtgtacaagaacatggccttcggc
ctgaaggtggccggcagcagcaagagcgagatcgatacgcgcatccgccacgccgctgcc
atcctcaagatcgaccatctgctgcagcgcctgccgcgtgaactctcgggcggccagcgc
cagcgcgtagccattggccgcgccatcgtgcgccagccgcgcctgttcctgttcgacgag
ccgctctccaatctcgatgcggcgctgcgcgtgcagacccggctggaaatcgccaagctg
caccggcaactggccgccaccatcgtctacgtcacccacgatcaggtggaagccatgacc
ctgggcgacaagatcgtggtcatgcacgagggccgcatccagcaggccggcactcccctg
gagctgtaccagcagccgcagaacctgttcgtggcgggcttcatcggttcgcccaaaatg
aatttcttccccggcgtggtcacgcgctgtgatgacagcggcgtgcaggtcgagatcacc
ggcgggctgcggctgctggccgatgtcgatccacagggtgtcacgacaggtgcagcagtc
accctcggcctgcgcgccgagcagatccgcgaaggtctgggcgatggtcagccattgcgc
ggtgtggtcaacctggtggagcacctgggcgaggccaacttcctctacgtgacgctggag
ggcggccatgacatcgtggtgcgcggcgatggcaatcgcagcgtccacatcggcgagcag
cttgcgctgtcggtgcagagccacgccttccatctcttcgatgcgcaaggccaggcgctg
cggcggcgcaatcccggcaacctgcaggcggcacgccgtctggggcaggactga
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