Helicobacter pylori F57: HPF57_0055
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Entry
HPF57_0055 CDS
T01912
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hex
Helicobacter pylori F57
Pathway
hex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF57_0055 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hex03400
]
HPF57_0055 (ung)
Enzymes [BR:
hex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPF57_0055 (ung)
DNA repair and recombination proteins [BR:
hex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF57_0055 (ung)
Prokaryotic type
HPF57_0055 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAJ59129
LinkDB
All DBs
Position
61105..61806
Genome browser
AA seq
233 aa
AA seq
DB search
MKLFDCASLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEASAPLIVVLLGKI
AQKKIALIPPNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttgactgcgcttctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttatttcttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatcaa
caagaattgcctgtggcgatgggtttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgcctgtgccttgt
tgtggggatttgagtgcatgggctaaaaggggcatgctgttattgaatgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcattggttgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccagcgcccccttgatcgtggtgctattaggaaagatc
gcccaaaaaaagatcgctctaattccccctaacaaacacatcatcatcacggcccctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagagatttaccataaggattttgattttagtttatga
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