Helicobacter pylori F57: HPF57_0231
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Entry
HPF57_0231 CDS
T01912
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hex
Helicobacter pylori F57
Pathway
hex00300
Lysine biosynthesis
hex01100
Metabolic pathways
hex01120
Microbial metabolism in diverse environments
hex01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPF57_0231 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hex01002
]
HPF57_0231 (dapE)
Enzymes [BR:
hex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HPF57_0231 (dapE)
Peptidases and inhibitors [BR:
hex01002
]
Metallo peptidases
Family M20
HPF57_0231 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
BAJ59305
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All DBs
Position
complement(233296..234477)
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AA seq
393 aa
AA seq
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MDALEITQKLISYPTITPKECGIFEYIKSLFPNFKTLECGENGVKNLFLYRIFNPPKEHI
EERHAEEKHAKKEHTKENVKPLHFCFAGHIDVVPPGNHWQSDPFKPIVKEGFLYGRGAQD
MKGGVGAFLSATLNFNPKTPFMLSILLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAIVAE
PTCEKVLGDSIKIGRRGSINGKLILKGIQGHAAYPQKCQNPIDTLASVLPLISGVHLDDG
DEYFDPSKLVITNLHAGLGANNVTPASVEVIFNARHSLKTTKESLKEYLEKVLKSVPYTL
ELESSSSPFITASHSKLASVLKENILKTCHATPLLNTKGGTSDARFFSAHGIEVVEFGVI
NDRIHAIDERVSLKELELLEKVFLGVLENLSEK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttagaaatcactcaaaagctcatcagctaccccaccatcacgcccaaagaa
tgcggtatttttgaatacattaaatcgctttttcctaattttaaaactctagagtgtggg
gaaaatggcgtgaaaaacctttttttataccgcatttttaaccctcctaaagagcatata
gaagaaaggcatgcagaagaaaagcatgcaaaaaaagagcatacaaaagaaaatgttaag
cccttgcatttttgctttgcagggcatattgatgtcgtgcctcctggaaatcattggcaa
agcgatccctttaaacccattgttaaagaggggtttttatacggccgtggggcgcaagac
atgaaaggaggcgtgggggcgtttttgagcgcgactttaaattttaaccctaaaaccccc
ttcatgctttctattttactcacaagcgatgaagaagggccagggatttttggcactagg
cttatgttagaaaaactcaaagaaaaagatttgctccctcacatggcgattgtggctgaa
cccacttgcgaaaaagtcttaggcgatagcatcaaaattggccgaagaggctccattaat
ggcaaactcattttaaaaggcattcaagggcatgcggcttacccgcaaaaatgccaaaac
cccattgatacgctcgcttctgttttgcctttgatttcaggagtccatttagacgatggc
gatgaatattttgacccttcaaaattggttatcaccaacttgcatgcagggttaggagcg
aataatgtaacgcccgcaagcgtagaagtcatttttaatgcacgccattctttaaaaacc
accaaagaaagtttgaaagaatatttagaaaaggttttaaaaagcgtgccttacacttta
gaattagaatcaagcagttcgcctttcatcacggcttctcattcaaagcttgccagcgtt
ttaaaagaaaatattttaaagacatgccatgccaccccccttttaaacaccaaaggcggc
acgagcgatgcgcgattttttagcgctcatggcatagaggtggtagaatttggcgttatt
aatgacaggatccatgccattgatgaaagggtgagcttgaaagaattagagcttttagaa
aaagtgtttttgggggttttagagaatttaagcgagaaataa
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