Helicobacter pylori F57: HPF57_0232
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Entry
HPF57_0232 CDS
T01912
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hex
Helicobacter pylori F57
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hex03016
]
HPF57_0232 (gidA)
03036 Chromosome and associated proteins [BR:
hex03036
]
HPF57_0232 (gidA)
Transfer RNA biogenesis [BR:
hex03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPF57_0232 (gidA)
Prokaryotic type
HPF57_0232 (gidA)
Chromosome and associated proteins [BR:
hex03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HPF57_0232 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_3
Pyr_redox_2
FAD_oxidored
AlaDh_PNT_C
HI0933_like
Pyr_redox
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAJ59306
LinkDB
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Position
complement(234488..236353)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVIGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDNSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLIIENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGTHQNQNGRFGENASNS
LALNLRDLGFKVERLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAVLALKNQDPFILKRNEAYISVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEKDFYEGLKKDKQEIQDHLKRLKEC
VLTPSKEVLKRLNELDENPINDKVDGVSLLARDSFNPEKMRSFFSFLTPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtgattggtggggggcatgcaggcattgaagcgagc
ttgattgcagccaaaatgggggctagagtgcatctaatcaccatgctcatagacacgatc
ggtttggcgagctgtaacccagcgattgggggcttgggtaaagggcatttgactaaagaa
gtggatgttttagggggggctatggggattattacggataatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcagttagagggactagagcgcaaattgatatggat
acttaccgcatttttgcaaggaatcttgttttaaacacccctaatttgagcgtctctcaa
gaaatgactgaaagtttaatcattgaaaatgatgaggtagtgggtgtaaccacgaacatt
aacaacacttataaggctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcacgcaccaaaaccaaaacgggcgctttggggaaaacgcttctaattct
ttagccttgaatttaagagatcttggctttaaggtggaaaggttaaaaaccggcacttgc
ccaagagtggcgggcaatagcattgattttgaaggattagaagagcattttggggacaca
aaccctccctattttagctataaaaccaaagattttaaccccacccaactctcatgtttt
atcacttacaccaaccctattacccaccaaatcatcagggataatttccaccgagccccc
ctatttagcggtcaaattgaaggcataggcccaaggtattgccctagcattgaagataag
atcaaccgcttcagcgaaaaagaacgccaccagctgtttttagagcctcaaaccattcac
aaaagcgaatattatatcaacggcttaagcacctctttacccctagatgtgcaagaaaag
gtcatccactctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgattttatccagcccacggaattgacccacactttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaatgggactaccggctatgaagaagcggcggctcaa
gggcttatggctgggattaatgcggtattagccttaaagaatcaagacccctttattttg
aaacgcaatgaagcttatatcagcgttttgattgatgatttggttactaaaggcacgaat
gaaccttacagaatgtttaccagccgagccgaataccgcttgcttttaagagaggacaac
acgctttttaggttaggcgaacatgcctatcgtttagggcttatggaaaaggatttttat
gagggattaaaaaaagacaaacaagaaatacaagaccatctcaaacgccttaaagaatgc
gtccttacccccagcaaagaagtgttaaaacgcttgaatgaattagacgaaaaccctatc
aatgacaaggttgatggcgttagccttttagcacgcgatagttttaatccagaaaaaatg
cgctcctttttcagctttttaacgcctttgaatgagcgggttttagagcagattaaaatt
gaatgcaaatataatatttatattgaaaagcaacacgaaaatatcgctaaaatggatagc
atgctcaaagtttctatccctaaaggttttgtgtttaaaggcattccaggcttaagctta
gaagcggtagaaaagttagaaaaattccgccctaaaagcctttttgaagcctcagaaatc
agcgggatcaccccggcgaatttagatgttttgcatttatacatccatttgcgaaaaaac
tcttaa
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