Helicobacter pylori F57: HPF57_0284
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Entry
HPF57_0284 CDS
T01912
Symbol
topA_3
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hex
Helicobacter pylori F57
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hex03032
]
HPF57_0284 (topA_3)
03400 DNA repair and recombination proteins [BR:
hex03400
]
HPF57_0284 (topA_3)
Enzymes [BR:
hex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPF57_0284 (topA_3)
DNA replication proteins [BR:
hex03032
]
Prokaryotic type
DNA Topoisomerases
HPF57_0284 (topA_3)
DNA repair and recombination proteins [BR:
hex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPF57_0284 (topA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
SpecificRecomb
Motif
Other DBs
NCBI-ProteinID:
BAJ59358
LinkDB
All DBs
Position
290092..292035
Genome browser
AA seq
647 aa
AA seq
DB search
MFNMYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTD
KKKDKSTHINYMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNIAKTIYRTEFHEITKS
GVEKGLNNSVLFSQSNLNLYYSWLGRIVSDQFVGFTLTPYLRKNIKNFEVSAGRVQTPVL
SILVELDRKIQAFEQKNIDEKLSYSIEAIIDVLGSQISITLVEENKRKVFETKELAQNFL
NDLRNNLNPLAFLDAVEQKDKEKSPPKPFTTSNLLKDGVRILEMSVKQIQEHAQKLFEAG
LITYIRTDSEALSKEYLQEHQAFFENIYPSAYEYREYRAGKNSQAEAHEAIRITHPHCYE
DLKKVCEKHNITDIDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKMHSFKCSFSKLKS
KGFKAIKDLEEEKEDEEEIESDLDFSSLQLKTQMPILDFNIKELKAKAPSPYTESTFIAM
METYGIGRPSTYASVFEILKNKNYITLEGKNRKITPTALGKSIVDFFLNDNQTQWIAISK
VDDSFTKKLEEMLDMIIKDGKSAYLDLMQNIQKKLGTEISNLYRNNSNNNVSATKKEMIP
PTEKQLNFVETIEKTLQIKASDMTKKDKFACMKFIEEHSKKMPKKDN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatgtataaaaactgcgtatttatcatagaaagtcccaataagatcgctaaa
atcaaagaattaacaggaagttcatttgtttttgcgactggtgggcattttgttgagcta
gtcaatattgaagtgagtaaagaatttaatcctatttttgaaatcaaaaaaagcacggat
aagaaaaaggataaatccactcatatcaactatatgataaatcaatgtaaagataaagta
gtctatattgctactgaccctgatagagagggttatgggataggttataaattttatgaa
aaaatcaaaaatatagctaaaacaatttatcgcactgagtttcatgaaatcacaaaaagc
ggtgtagaaaaaggcttgaacaattctgtgctattttctcaaagcaatctcaatctatat
tatagttggctaggtaggattgtaagcgatcaatttgtaggctttactttaacgccttat
ttgcgcaaaaacattaaaaattttgaagtgagtgctggtagggttcaaactcctgttctt
tccattttagtagaattagacagaaaaatccaagcctttgaacaaaagaatattgatgag
aaattaagttatagcatagaagctattattgatgtgttaggttctcaaatctctattact
ttagtagaagagaataaaaggaaagtgtttgagaccaaagaattagcccaaaacttttta
aatgacttaagaaacaatcttaaccccttagcttttttagacgcagtagagcaaaaagat
aaagaaaaatctccacctaaacctttcaccacttctaatcttttaaaagatggggttaga
attttagaaatgagcgttaagcaaatccaagaacacgcccaaaaactttttgaagctgga
ttgattacttatattcgcaccgatagtgaagcgttaagtaaagaatacttgcaagagcat
caagcgttttttgaaaatatttatcctagtgcatatgaatacagagaatatagggctggt
aaaaattcacaagctgaagcgcatgaggctataagaattacacaccctcactgctatgaa
gatcttaaaaaagtgtgcgagaaacacaatattacagatattgatgatttaaaagtctat
acgcttatcttttttaacaccatttgctctcaaagtaaaaacgctatttacgaaaacaca
actttaaattttaaagtaaaaatgcacagctttaaatgcagttttagcaaactcaaatct
aaaggctttaaagcgattaaggacttagaagaagaaaaggaagatgaagaagagattgaa
agcgatcttgatttttctagcttgcaattaaaaactcaaatgcctattttagattttaat
atcaaagaactaaaagctaaagctcctagcccttatactgaaagcacttttatcgcaatg
atggaaacctatggcataggaagacctagcacttatgcaagtgtatttgagatcttaaaa
aacaaaaattacattacattagagggcaaaaataggaagatcacgcccacagctcttggt
aaaagcattgttgatttcttcttgaatgataaccaaacacaatggattgctatttctaaa
gtggatgatagttttacaaaaaaattagaagaaatgttagatatgattataaaagatggt
aaaagtgcttatcttgatttaatgcaaaatatccaaaagaaattaggcacagaaatttct
aacttatatagaaataatagcaataacaatgtttctgctacaaaaaaagaaatgatacct
ccaactgaaaaacaacttaattttgtagaaactatagaaaaaactcttcaaataaaagct
tctgatatgacaaaaaaagacaagtttgcgtgcatgaagtttatagaagaacatagtaaa
aaaatgcccaaaaaggataattga
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