Helicobacter pylori F57: HPF57_0539
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Entry
HPF57_0539 CDS
T01912
Symbol
glcD
Name
(GenBank) putative Glycolate oxidase
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
hex
Helicobacter pylori F57
Pathway
hex00630
Glyoxylate and dicarboxylate metabolism
hex01100
Metabolic pathways
hex01110
Biosynthesis of secondary metabolites
hex01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPF57_0539 (glcD)
Enzymes [BR:
hex01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
HPF57_0539 (glcD)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Med15_C
Motif
Other DBs
NCBI-ProteinID:
BAJ59613
UniProt:
E6NR47
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All DBs
Position
550434..551813
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AA seq
459 aa
AA seq
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MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATKERHLPSGVIFPKNEQEISQILKYCN
EHRIIVVPRGAGSGFTGGALSVSGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQN
EVEKLNLFYPPDPASENQSTLGGNVAENAGGMRAAKYGITKDYVMALRVVLANGEIIRAG
KKTIKDVAGFNVAGLMIASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKT
MSSGVTPVAMEFLDNLSIKAVEERFSKGLPKDAGAILITQVDGVVKEQIAWQLNEIEKHF
KANGCVGFKIAQNEQEEQDLWFSRRNASQSISVYGKKKLNEDVTVPRASLPSLLQEVAKI
SQKYGFKIPCFGHTGDGNVHVNIMLEDPNRDLEKGHQAMEEIFQAAISLEGTLSGEHGIG
LSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaagcaacacatccaatattttaaaaacctagtagggggagaggattttttc
actgatttagcgcatttgaacgcttattgctatgacgctaccaaagaaaggcatttgcct
agcggtgtgattttccctaaaaacgagcaagaaatcagccagatcttaaaatattgcaac
gagcatcgcatcatcgttgtgcctaggggggctgggagcggttttacaggaggggcgttg
agcgtgagcggagggctagttttaagcgtggaaaagcatttggataagattttagagatt
gacactaaaaatttaatcgctagagtggaaccgggcgtgatcaacaagcatttccaaaac
gaagtggaaaaattaaatctcttctaccccccagatccagcgagtgagaatcaaagcact
ttaggggggaatgtcgctgaaaacgccggtggcatgcgtgcggctaaatacggcattacg
aaagattatgtcatggctttaagggtggttttagcgaatggtgaaatcataagggcaggt
aaaaaaacgatcaaagatgtcgcaggctttaatgttgcagggctgatgatcgctagtgag
gggtgtttgggcgtgatttctgaaatcactttaaagcttttagccaaaccgcctctaaaa
caaagcgcaatgggggtttttaatcatattgaagacgccatgaacgccgtttataagaca
atgagcagcggcgttacgcctgtggcgatggaatttttggataatttgagtatcaaagcg
gttgaagaacgattttctaaaggcttacccaaagacgctggagcgatactcatcactcaa
gtggatggcgtggtaaaagagcagattgcatggcaactcaatgagatagaaaagcatttt
aaagccaatggttgcgtgggttttaagatcgctcaaaacgaacaagaagagcaggattta
tggttttcaaggcgtaacgcttctcaaagtattagcgtttatggtaaaaagaaattgaat
gaagatgtaaccgttcctagggcgagtttgccgagtttgttgcaagaagtcgccaaaata
agccaaaaatacggctttaaaatcccttgctttgggcatacgggcgatggcaatgtgcat
gtgaatatcatgctagaagatcctaatagggatttagaaaaagggcatcaggctatggaa
gagatttttcaggccgctatcagtttggaggggactttaagcggggagcatggcataggc
ttgtctaaagccaaattcatgcctttagcgtttaatcatagtgaaatggaactttttagg
aatattaaaaaagcccttgatcctaataatattttaaacccttttaaaatggggttgtaa
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