KEGG   Helicobacter pylori F57: HPF57_0561
Entry
HPF57_0561        CDS       T01912                                 
Symbol
cagU
Name
(GenBank) cag pathogenicity island protein
  KO
K12096  cag pathogenicity island protein 11
Organism
hex  Helicobacter pylori F57
Module
hex_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hex00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hex02044]
    HPF57_0561 (cagU)
Secretion system [BR:hex02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPF57_0561 (cagU)
SSDB
Motif
Pfam: tRNA-synt_1f
Other DBs
NCBI-ProteinID: BAJ59635
LinkDB
Position
578847..579494
AA seq 215 aa
MNDTTEHHGSNSLNAPSPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIE
IEKLPQEKRYELLMQIGQAKQRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFL
RTSKNMDLVESLKTKLKLQYFYYAFGAGAVLFFGLETIRSIYELYILGIGSTNDKVLFVL
KNICFIGMGYLIYKVIKVIGIKNFINGLFISKKQE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaacgatacaacagagcatcatggatccaattcgctaaacgccccatcacctagcaac
tcacagagcaatgatcttttaaatttgctagactcgttatatcccaaagggagtttaggg
gagcaaagatttcacgaagctctaaagaatcaagaagagttgaaaaatatcctaatagaa
atagaaaagctaccgcaagaaaaaaggtatgaacttctgatgcaaatagggcaagccaaa
cagagaataatggaagcatacgctcattcattcttgggatatatagggggactagagcat
ctgttaggattatgtatgggtgggatatttgttttgtttgcaatctattttgtattttta
agaactagcaaaaacatggatttggtggaaagtctaaaaacaaaactaaaacttcagtat
ttttactatgcctttggtgcaggtgcggttttgttttttggattagaaacaattagatct
atttatgaactatatatattaggaattggtagcactaacgacaaggtgctctttgttttg
aaaaacatttgcttcataggtatgggctatttgatttataaagttattaaggttattggt
ataaaaaattttatcaatggtcttttcatttcaaagaaacaagaataa

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