Helicobacter pylori F57: HPF57_0935
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Entry
HPF57_0935 CDS
T01912
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hex
Helicobacter pylori F57
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hex03016
]
HPF57_0935 (truD)
Enzymes [BR:
hex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPF57_0935 (truD)
Transfer RNA biogenesis [BR:
hex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPF57_0935 (truD)
Prokaryotic type
HPF57_0935 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAJ60009
LinkDB
All DBs
Position
995764..996909
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AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHTSIDFHFNPSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QVFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLTYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGPQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISTFSVKENLEFFKQKNLS
VNSDTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFVENITSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatacgagcattgattttcat
ttcaatcctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagtaac
acaggcgaacatgccgttatccaagtgagaaaaagcggtttaagcactttagaaatgctt
caagttttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcactgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaagaaaccttaaaatcctgtctttgacttaccac
cacaataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaaaactgaacaagttttagaacaaatcgcacagtttggc
atgcctaattattttggcccgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcacttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gtcaattcagacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgccattacccttacgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgcgcctacggggttactagacggcaaaaag
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataatctttta
aatagtcatgctaaaacgctaggctctaggcggtttttttgggtgtttgtagaaaatata
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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integrated database retrieval system
