Helicobacter pylori F57: HPF57_1393
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Entry
HPF57_1393 CDS
T01912
Symbol
rep
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hex
Helicobacter pylori F57
Pathway
hex03420
Nucleotide excision repair
hex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPF57_1393 (rep)
03430 Mismatch repair
HPF57_1393 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hex03400
]
HPF57_1393 (rep)
Enzymes [BR:
hex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPF57_1393 (rep)
DNA repair and recombination proteins [BR:
hex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPF57_1393 (rep)
MMR (mismatch excision repair)
Other MMR factors
HPF57_1393 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAJ60467
LinkDB
All DBs
Position
complement(1470861..1472906)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILDNLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMGLLKRACDFSVLDSDE
TKTLCKQLKISSFRASISQIKNGMIDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLAAKKDDRFFIRRVLNKPSRGLGKITQEWIFSLLDGENLN
LEEALKLGVFKGKLNPKNEYALNKFIAIIGRLREAFEISVERFCARFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLKQDNPPKQDHKKDAPIKVGDLIRHKLFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISVKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttagacaatttaaacgaagcgcaaaaaatcgctgcaagc
cacattcaagggcctttgctgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattgttgaaa
aatcaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgggccttttaaaaagagcgtgcgatttttcggtgttagatagcgatgag
acaaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcaaatc
aaaaacggcatgattgatttaagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttacaagataatgaaaccatcgccaaagagactagcgagcgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctccagtgctgaaattttagcttgcgctaactccctg
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaagggatcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcttggatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggagcggtgagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagcggctaaaaaagacgatcgctttttcatcaggcgcgttttaaacaagccctcaaga
ggccttggtaagatcactcaagaatggattttttctcttttagatggtgagaatttgaat
ttagaagaagcgctaaaacttggggtgtttaaaggcaaattaaaccctaaaaacgaatac
gctttgaacaaatttatcgctataatagggcgtttgagggaggcttttgaaatttcagta
gagaggttttgcgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagcttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagcgttctagatacc
cataatacagaaaacgcgcaaaaagtaagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcagctctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaggccaagttgctcaaacaagataacccccctaaa
caggatcataaaaaagatgcgcccattaaagtgggggatttgatcaggcataaacttttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagtaaaatttgtagaaaaagtggataacggg
ttttga
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