Helicobacter pylori F57: HPF57_1463
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Entry
HPF57_1463 CDS
T01912
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hex
Helicobacter pylori F57
Pathway
hex03030
DNA replication
hex03430
Mismatch repair
hex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPF57_1463 (dnaQ)
03430 Mismatch repair
HPF57_1463 (dnaQ)
03440 Homologous recombination
HPF57_1463 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hex03032
]
HPF57_1463 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hex03400
]
HPF57_1463 (dnaQ)
Enzymes [BR:
hex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPF57_1463 (dnaQ)
DNA replication proteins [BR:
hex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPF57_1463 (dnaQ)
DNA repair and recombination proteins [BR:
hex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPF57_1463 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAJ60537
LinkDB
All DBs
Position
complement(1554346..1555209)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSIRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETPLPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaagaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgtgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtggaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgagccattttgtccatacgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccacagagcctatgcagacgct
ttagcgagttataaactctttgaaatatgcttattaaacttgcccagttacatcaaaaca
acaatggatttgattgatttttccaaatgcgctaacactttgatcaaaagacccccaaga
gccagacaccaagagactccactgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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