Helicobacter pylori XZ274: MWE_0973
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Entry
MWE_0973 CDS
T02130
Name
(GenBank) cytotoxin-associated protein A
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hey
Helicobacter pylori XZ274
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFJ81774
LinkDB
All DBs
Position
complement(883301..886894)
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AA seq
1197 aa
AA seq
DB search
MTNETIDQTTTPDQTLNQTDFVPQRFINNLQVAFLKVDDAVASFDPDQKPIVDKNDRDNR
QAFEKISQLREEYANKAIKNPTKKNQYFSDFINKSNDLINKDNLIAVDSSVESFKKFGDQ
RYQIFTSWVSLQKDPSKINTQQIRNFMENIIQPPISDDKEKAEFLRSAKQSFAGIIIGNQ
IRSDEKFMGVFDESLKERQEAEKNGEPDGGDWLDIFLSFVFNKKQSSDLKETLHQEPRPD
FEQNIATTTTDIQGLPPEARDLLDERGNFSKFTLGDMEMLDAEGVADIDPNYKFNQLLIH
NNALSSVLMGSHSNIEPEKVSLLYGDNGGPEARHDWNATVGYKNQQGSNVATLINAHLNN
GSGLVIAGNEDGIKNPSFYLYKQDQLTGLKQALSQEEIQNKVDFMEFLAQNNARLDSLSE
KEKEKFQTEIEDFQKDRKAYLDALGNDHIAFVSKKDPKHLALVTEFGNGEVSYTLKDYGK
KQDKALDGETKTTLQGSLKYDGVMFVNYSNFKYTNASKSPDKGVGTTNGVSHLEANFSKV
AVFNLPNLNNLAITNYIRRDLEDKLWAKGLSSQEANKLIKDFLNSNKELVGKVSNFNKAV
AEAKNTGNYDEVKKAQKDLEKSIRKREHLEKEVAKKLESRNDNKNGMEAKAQANSQKDKI
FALINQEASKEARAAAFDPNLKGIRSELSDKLENINKNLKDFGKSFDELKNGNNKDFSKA
EETLKTLKDSMKDLGINPEWISKVENLNAALNDFKNGKNKDFSKVTQAKSDLENSIKDVS
INQKITDKVDNLNQAVSEAKLTGDFSKVEQALAELKNLSLDQIGKNSDLQKSVKNGVNGT
LVGNGLSKTEATTLTKNFSDIRKELNEKLFGNSNNNNNGLKNNTEPIYAQVNKKKAGQAT
SPEEPIYAQVNKKKAGQATSPEEPIYTQVAKKVNARIDRLNKIASTINGKIDQLNRTASA
NKGVGDFSGVGQAASPEPIYATIDFDEANQAGFPLRRSAAVNDLSKVGLSREQELTRRIG
DLNQAVSEAKTGHFGKLEQKIDELKDSTKKNAVSLWVESAKQVPTGLQAKLDNYATNSHT
RINSNVKNGGINEKATGMLTQKNPEWLKLVNNKIVAHNVGSIPLSDYDKIGFNQKNMKDY
SDSFKFSTKLNNAVKDIKSSFVQFLTNTFSQGSYNLMKANVEHGVKNTNTKSGFQKS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaaccattgatcaaacaacaacaccagatcaaacactaaaccaaacggat
tttgttccgcaacgatttatcaataatcttcaagtagctttccttaaagttgatgacgct
gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaatgatagggataatagg
caagcttttgagaaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaat
cccaccaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgatcaac
aaagacaatctcattgctgtagattcttccgtagagagctttaagaaatttggggatcag
cgttaccaaatttttacgagttgggtgtcccttcaaaaagatccgtctaaaatcaacacc
caacaaatccgaaattttatggaaaatatcatacaaccccctatctctgatgataaggaa
aaagcagagtttttgaggtctgccaaacaatcttttgcaggaattatcatagggaatcaa
atccgatcggatgaaaaattcatgggcgtgtttgatgaatctttgaaagaaaggcaagaa
gcagaaaaaaatggagagcctgatggtggggattggttggatatttttttatcatttgta
tttaacaaaaaacaatcttccgatctcaaagaaacgctccatcaagagccaaggcctgat
tttgaacaaaatatagccactaccaccaccgacatacaaggcttaccgcctgaagctaga
gatttgcttgatgaaaggggtaatttttctaaattcactcttggtgatatggaaatgtta
gatgctgagggagtcgccgatattgatcctaattacaagtttaatcaattattgatccac
aataacgctctatcttctgtgttaatggggagtcatagtaacatagaacctgaaaaggtt
tcattattgtatggggataatggtggtcctgaagctaggcatgattggaacgccaccgtt
ggttataaaaaccaacaaggcagtaatgtggccacactcattaatgcgcatcttaataac
ggtagtgggttagtcatagcgggtaatgaggatgggattaagaaccctagcttctatctc
tacaaacaagaccaactcacaggcttgaaacaagcgttgagtcaagaagagatccaaaac
aaagtagatttcatggaatttcttgcgcaaaacaatgctaggttagatagcttgagcgag
aaagagaaagaaaaattccaaactgagattgaagatttccaaaaagaccgtaaggcttat
ttagacgctctagggaatgatcacattgcttttgtttctaaaaaagacccaaaacattta
gctttggttactgagtttggtaatggggaagtgagctatactctcaaagattatgggaaa
aaacaagataaagctttagatggggagacaaaaaccactcttcaaggtagcctaaaatat
gatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagagtcct
gataagggtgtaggcactacgaatggcgtttcccatttggaagcaaattttagcaaagta
gctgtctttaatttgcctaatttaaataatctcgctatcactaattatataaggcgagat
ttagaagataaactgtgggctaaaggattgtcctcgcaagaagctaataagctcatcaaa
gactttttgaacagcaacaaggaattggttggaaaagtttcaaacttcaataaagctgta
gctgaagctaaaaacacaggcaattatgatgaagtgaaaaaagctcagaaagatcttgaa
aaatctataaggaaacgagagcatttagagaaagaagtagcgaaaaaattggagagcaga
aacgacaacaaaaatgggatggaagcaaaagctcaagctaacagccaaaaagataagatt
tttgcgcttatcaatcaagaggctagtaaggaagcaagagcggccgcttttgatccgaat
cttaaaggcattaggagcgaattgtctgataaacttgaaaatatcaacaagaatttgaaa
gactttggcaaatcttttgatgaactcaaaaatggcaacaataaagatttcagcaaggca
gaagaaacgctaaaaacccttaaagactcgatgaaagatttaggcatcaatccagaatgg
atttcaaaagttgaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaaataag
gatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgtgtcc
atcaatcaaaagataacggataaagttgacaatctcaatcaggctgtatcagaggctaaa
ttaacaggcgatttcagtaaggtagagcaagccctagccgaactcaaaaacttgtcattg
gatcaaattggaaaaaattctgatctacaaaaatccgttaaaaatggtgtaaatggaacc
ctagtcggtaatgggttatctaaaacagaagccacaacgctcaccaaaaatttttcggac
atcaggaaagaattgaacgagaaattatttggaaattccaataacaataataatggactc
aaaaacaacacagagcctatttatgctcaagttaataaaaagaaagcaggacaagcaact
agccctgaagagcccatttatgctcaagttaataaaaagaaagcaggacaagcaactagc
cctgaagagcccatttatactcaagttgctaaaaaggtgaatgcaagaattgatcgactc
aacaaaattgcatcaacaataaatggaaaaattgaccaactcaacagaactgcgtcagca
aataaaggagtgggcgatttcagtggagtggggcaagcagctagccctgaacccatttac
gctacaattgattttgatgaggcaaatcaagcaggcttccctttgagaagaagtgctgca
gttaatgatctcagtaaagtagggctttcaagggaacaagaattgactcgtagaattggc
gatctcaatcaggcagtatcagaagctaaaacaggtcattttggcaaactagaacaaaag
atagatgaactcaaagattctacaaaaaagaatgctgtgagtctatgggttgaaagcgcg
aaacaagtgcctactggtttgcaagcgaaattggacaattacgctactaacagccacaca
cgcattaatagcaatgtcaaaaatggaggaattaatgagaaagcgaccggtatgctaacg
caaaaaaaccctgagtggctcaagctcgtgaataataagatagttgcgcataatgtggga
agcattcctttgtcagattatgataaaattggattcaaccaaaagaatatgaaagattat
tctgattcgttcaagttttccaccaagttgaacaacgccgtaaaagacattaagtctagc
tttgtgcaatttttgaccaatacattttctcaaggatcttacaacttgatgaaagcaaat
gtggaacatggagtcaaaaatactaatacaaaaagtggtttccagaaatcttaa
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integrated database retrieval system
