Helicobacter pylori XZ274: MWE_1296
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Entry
MWE_1296 CDS
T02130
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hey
Helicobacter pylori XZ274
Pathway
hey03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MWE_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hey03400
]
MWE_1296
DNA repair and recombination proteins [BR:
hey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MWE_1296
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MWE_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Microtub_bd
Kinesin
DUF87
AAA_7
DUF4252
HAM1_N
UBA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFJ82008
LinkDB
All DBs
Position
complement(1178325..1180301)
Genome browser
AA seq
658 aa
AA seq
DB search
MPLFDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANIIAQTNKPAL
IMSHNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLER
LRLSAATSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGY
SRNEVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALERNEIKRLDSV
MLYAASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATG
VCKGIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRK
SVLVEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSQKNVAEQIIRPTGL
LDPKFEVRDSDKQVQDLFDEIKLVVARDERVLITTLTKKMAEELCKYYAEWGLKARYMHS
EIDAIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQT
MGRAARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKLHHITPKTVTRALEEELK
LRDDEVKIAKALKKDKIPKSEREKIIKELDKKMRECAKNLDFEEAMRLRDEIAKLRTL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgatttaaaaagcccttacccaccagcaggcgatcagccccaagccata
gaagccttaacgaaaagcttgaaaaataataaccattatcaaactttagtgggggttaca
gggagcggtaaaacttatacgatggccaatatcatcgctcaaaccaacaaacccgcttta
atcatgagccataataagaccttatgcgcgcagctttatagcgagtttaaggcgtttttc
ccgcataatagggtggagtattttatctcccactttgactactaccagcctgaaagctat
attcctagaagggatttattcattgaaaaagacagctctattaatgatgatttagagcgt
ttgagattgagcgcggccacctcacttttaggttatgatgatgtgattgtgatagcgagc
gtttcggctaattatggtttgggtaaccctgaagaatatttaaaagtcatggaaaaaatc
aaagtgggcgagaagcgtgcttataagagctttttattaaagctagtagaaatgggttat
agccgtaatgaagtggtgtttgatagggggagttttagagcgaccggagaatgcgtggat
attttccccgcttataatgacgctgaatttatcaggattgaattttttggcgatgagata
gaaaggattgctgtctttgacgctttagaaagaaatgaaatcaagcgcttggattctgtt
atgctctatgcggccagtcagtttgccgtagggagtgagaggttgaatttagccattaaa
agcattgaagatgaactcgctttaagattgaaattttttaaagagcaggataaaatgctt
gaatacaaccgcctcaaacaacgcaccgagcatgatttagaaatgattagcgcaaccggt
gtgtgtaagggtattgaaaattacgcacgccattttacaggcaaagcccctaatgaaacg
cctttttgtttgtttgattatttagggatatttgagcgggagtttttagtcattgtggat
gaaagccatgtgagtttgccgcagtttggagggatgtatgcaggggatatgagcaggaaa
agcgttttagtggaatatggttttagattgcctagcgctttagataaccgccctttaaaa
tttgatgaatttatccataaaaattgccaattcctttttgtgtccgctacgcccaataag
ctagaattagagctttctcaaaagaatgtcgctgagcaaatcattcgccctacagggctt
ttagaccctaaatttgaagtgcgagacagcgataagcaagtccaggatttatttgatgaa
atcaagttagtggtggctagagatgaaagggtgcttatcaccacgctcactaaaaaaatg
gcagaagaattgtgcaaatattatgctgaatggggcttgaaggcgcgttacatgcatagt
gaaattgatgcgattgaacgaaatcacatcatccgctctttaaggcttaaagaatttgac
attttaatagggatcaatctcttaagagaagggctggatttgcctgaagtctctttagta
gcgatcatggatgcggataaagaagggtttttaaggagtgaaacaagcctcattcaaacc
atggggcgagccgctagaaacgctaatggcaaggttttattatacgctaaaaaaatcacc
caaagcatgcaaaaagcctttgaaattacgagctacaggcgtgctaagcaagaagagttt
aataagcttcatcatatcacccccaaaaccgttactcgcgctttagaagaggagttgaaa
ttaagagacgatgaggttaaaatcgctaaagccttaaaaaaggacaaaatccctaaaagc
gaaagggaaaagatcattaaagaactggataaaaaaatgcgagaatgcgcgaagaatttg
gattttgaagaagcgatgcgtttgagagacgaaatcgctaaattaagaacgctttaa
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integrated database retrieval system
