Helicobacter pylori BM012S: U064_0316
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Entry
U064_0316 CDS
T02940
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hez
Helicobacter pylori BM012S
Pathway
hez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U064_0316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hez03021
]
U064_0316
03400 DNA repair and recombination proteins [BR:
hez03400
]
U064_0316
Enzymes [BR:
hez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U064_0316
Transcription machinery [BR:
hez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U064_0316
DNA repair and recombination proteins [BR:
hez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U064_0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AHA89252
UniProt:
V5NNN7
LinkDB
All DBs
Position
294819..295853
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPIGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLNSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSHEQRESLKKRLEKLEDKGDND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgctagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggcttttgcttttaagctctgtggggtatgctcctataggtttaaag
attgaaggcgtccatcatgagtttgactcactaaggggggttactgaggatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggcgttggtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaggggcctatggagcttagg
gctagggatttgaattctgagcatatagaaatcgtcaatcctgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaagggatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccgctagatggctctttc
acgccgattaaaaaggtcgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaattgggcgtttttggcgaaagacccattgct
aacacggagtattcaggcgattacgctcaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgccaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaactcgtgttgatgagcgaagaagagcttaagggcgtgaagaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattgagtcatgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggagataacgactga
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