Helicobacter pylori BM012S: U064_0460
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Entry
U064_0460 CDS
T02940
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hez
Helicobacter pylori BM012S
Brite
KEGG Orthology (KO) [BR:
hez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hez03032
]
U064_0460
03400 DNA repair and recombination proteins [BR:
hez03400
]
U064_0460
Enzymes [BR:
hez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U064_0460
DNA replication proteins [BR:
hez03032
]
Prokaryotic type
DNA Topoisomerases
U064_0460
DNA repair and recombination proteins [BR:
hez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U064_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
Lar_restr_allev
DUF7575
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AHA89392
UniProt:
V5NP13
LinkDB
All DBs
Position
448408..450618
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILN
ALKTPRKIDMSKVNAQQARRFLDRIVGFKLSSLIASKITKGLSAGRVQSAALKLVIDKER
EIKAFKPLTYFTLDALFESHLEAQLISYKGNKLKAQELIDEKKAQEIKNELEKESYTISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSITLEPNALK
DYLKPEELKLYALIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQHRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
IKQTENANDGAKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKETIEG
VKCPECGGDIALKRSRKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERTYRKKKAH
ECIKCKERVFLEEENG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattattgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttgtccaaattcgct
ttaggcattaagattgatgaaacaggcttcactcctaattatgtcgtggataaagaccat
aaagaacttgtcaaacagatcatagagctttctaaaaaggcatctattacttatatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcatgtttgattgggggg
aaattggagagctatcctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgaaaaattgacatgtctaaggtcaatgcccaacaagccagacgc
tttttagatcggatcgtgggttttaagctcagctcgttgattgcatcaaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagcgcggctttaaagcttgtgattgataaagagaga
gagatcaaagcctttaaacctttaacctacttcacgctagacgctttatttgagtcgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaggagcttattgat
gaaaaaaaagctcaagagattaaaaacgaattagaaaaagaaagctacactatttccagt
atcgttaaaaaatctaaaaaatcccccacgccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagtatcgctcaaaaa
ttgtatgagggcgtagccaccccacaaggggttatgggggtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattactttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaagctctatgccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagcgagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcgcgctattcagaagcgagtttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctt
ttacaacacagagattacatcaaggtagaaaaaaagcaaatcagtgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaagaactggacaatatcgctcaaaataaagccgactaccagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagccgggaaaaagaatatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattggtc
aaaaaaaatagccgttatggggagtttatcgcttgcaataattaccctaaatgcaaatat
atcaaacagactgaaaacgccaatgatggagccaagcaagagttgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaattaccct
gaatgcaaaaacaccaaatcgttaaagaatacccctaacgccaaagaaacaatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagcaggaaaggctcgttt
tatggctgtaacaactaccctaaatgcaattttttatccaaccataagcctatcaataag
cgttgcgagaaatgccattatttgatgagtgaaagaacctatcgcaaaaaaaaggcgcat
gaatgcattaaatgcaaagagcgcgtgtttttagaggaagagaatggctaa
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