Helicobacter pylori BM012S: U064_0555
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Entry
U064_0555 CDS
T02940
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hez
Helicobacter pylori BM012S
Brite
KEGG Orthology (KO) [BR:
hez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hez03016
]
U064_0555
03036 Chromosome and associated proteins [BR:
hez03036
]
U064_0555
Transfer RNA biogenesis [BR:
hez03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
U064_0555
Prokaryotic type
U064_0555
Chromosome and associated proteins [BR:
hez03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
U064_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
Pyr_redox_3
FAD_oxidored
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
FAD_binding_2
TTC3
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
AHA89485
UniProt:
V5NLK0
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Position
complement(542407..544272)
Genome browser
AA seq
621 aa
AA seq
DB search
MVKESDILVVGGGHAGIEASLIAAKMGARVHLITMLIDTIGLASCNPAIGGLGKGHLTKE
VDVLGGAMGIITDHSGLQYRVLNASKGPAVRGTRAQIDMDTYRIFARNLVLNTPNLSVSQ
EMTESLILENDEVVGVTTNINNTYKAKKVIITTGTFLKGVVHIGEHQNQNGRFGENASNS
LALNLRELGFKVDRLKTGTCPRVAGNSIDFEGLEEHFGDTNPPYFSYKTKDFNPTQLSCF
ITYTNPITHQIIRDNFHRAPLFSGQIEGIGPRYCPSIEDKINRFSEKERHQLFLEPQTIH
KSEYYINGLSTSLPLDVQEKVIHSIKGLENALITRYGYAIEYDFIQPTELTHTLETKKIK
GLYLAGQINGTTGYEEAAAQGLMAGINAALALKNQAPFILKRNEAYIGVLIDDLVTKGTN
EPYRMFTSRAEYRLLLREDNTLFRLGEHAYRLGLMEQDFYKELKKDQQEIQDNLKRLKEC
VLTPSKEVLKRLNELDENPINDKVDGVSLLVRDSFNAEKMRSFFSFLAPLNERVLEQIKI
ECKYNIYIEKQHENIAKMDSMLKVSIPKGFVFKGIPGLSLEAVEKLEKFRPKSLFEASEI
SGITPANLDVLHLYIHLRKNS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaagaaagtgatattttagtggttggtggggggcatgcaggcattgaagcgagc
ttgattgcggctaaaatgggggctagggtgcatttaatcaccatgcttatagacacgatc
ggtttagcgagctgtaatcctgccattgggggcttgggtaaagggcatttgactaaagaa
gtggatgttttagggggggctatggggattattacggatcatagcggtttgcaatatcgt
gtgttaaacgcttctaaagggccggcggttagggggactagagcgcaaattgatatggac
acttaccgcatttttgcaagaaatctcgttttaaacacccctaatttgagcgtctctcaa
gaaatgaccgaaagtttaatccttgaaaacgatgaggtagtgggcgtaaccacgaacatt
aataacacttataaagctaaaaaagtgatcatcaccacaggcacttttttaaaaggggtg
gtgcatattggcgagcaccaaaaccaaaacgggcgctttggagaaaacgcttctaattct
ttagccttgaatttaagggagcttggctttaaggtggatcgcctaaaaaccggcacttgc
ccaagagtggcgggcaatagcattgattttgaaggcttagaagagcattttggggacaca
aaccccccctatttcagctataaaaccaaagattttaaccccacccaactctcatgcttt
atcacttacactaaccctattacccaccaaatcattagggataatttccaccgagccccc
ctatttagcggtcaaattgaaggcataggcccaaggtattgccctagcattgaagataag
atcaaccgcttcagcgaaaaagaacgccaccagctgtttttagagcctcaaaccattcat
aaaagcgaatattatatcaacggcttaagcacctctttacccctagatgtgcaagaaaag
gtcattcattctatcaaaggcttagaaaacgccctcatcacgcgctatggctatgcgata
gagtatgattttatccagcccacggaattgacccacactttagaaaccaaaaaaatcaaa
gggctttatttggccgggcaaatcaacgggactaccggctatgaagaagcagcggctcaa
gggcttatggctgggattaatgcggcattagccttaaagaatcaagccccctttatttta
aagcgcaatgaagcttatatcggcgttttgattgatgatttggttactaaaggcacgaat
gagccttacagaatgtttaccagccgagccgaataccgcttgcttttaagagaagacaac
acgctttttagattaggcgaacatgcctatcgtttagggcttatggaacaggatttttat
aaggaattaaaaaaagaccaacaagagatacaagacaatctcaaacgccttaaagaatgc
gtccttacccctagtaaagaagtgttaaaacgcttgaatgaattagatgaaaacccgatc
aatgacaaggttgatggcgttagtttgttagtgcgcgatagttttaatgcagaaaaaatg
cgctcctttttcagctttttagcccccttgaacgagcgggttttagagcagattaaaatt
gaatgcaagtataatatttatattgaaaagcaacacgaaaatatcgctaaaatggacagc
atgctcaaagtttctatccctaaaggttttgtgtttaaagggattccaggcctaagccta
gaagcggtagaaaagttagaaaaattccgccccaaaagcctttttgaagcctcagaaatc
agcgggatcactccggcgaatttagacgttttgcatttatacatccatttgcgaaaaaac
tcttaa
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