Helicobacter pylori BM012S: U064_0859
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Entry
U064_0859 CDS
T02940
Name
(GenBank) cag pathogenicity island protein CagA
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hez
Helicobacter pylori BM012S
Module
hez_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
DUF5659
Rsd_AlgQ
Motif
Other DBs
NCBI-ProteinID:
AHA89774
UniProt:
V5NN24
LinkDB
All DBs
Position
855594..859241
Genome browser
AA seq
1215 aa
AA seq
DB search
MTNETIDQQPQTEVAFNPQQFINNLQVAFLKVDNAVASYDPDQKPIIDKNDRDNRQAFNG
ISQLREEYSNKAIKNPTKKNQYFSSFINKSNDLINKDNLIDVESSTKSFQKFGDQRYRIF
TSWVSHQDDPSKINTRSIRNFMENIIQPPIPDDKEKAEFLKSAKQSFAGIIIGNQIRTDQ
KFMGVFDESLKERQEAEKSGEPTGGDWLDIFLSFIFDKKQSSDVKEAINQEPVPHVQPDI
ATTTTDIQGLPPESRDLLDERGNFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHNNALS
SVLMGSHNGIEPEKVSLLYGNNGGPEARHDWNATVGYKDQQGNNVATIINVHMKNGSGLV
IAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIQNKVDFMEFLAQNNAKLDNLSEKEKEK
FQNEIEDFQKDSKAYLDALGNDRIAFVSKKDPKHSALITEFGKGDLSYTLKDYGKKADKA
LDREKNVTLQGSLKHDGVMFVDYSNFKYTNASKNPNKGVGVTNGVSHLEAGFSKVAVFNL
PNLNNLAITSLVRRDLEDKLIAKGLSPQEANKLVKDFLSSNKELVGKALNFNKAVAEAKN
TGNYDEVKKAQKDLEKSLKKRERLEKEVVKNLESKSGNKNKMEAKAQANSQKDEIFALIN
KEANRDARAIAYAQNLKGIRRELSDKLENVNKNLKDFSKSFDEFKNGKNKDFSKAEEALK
ALKGSVKDLGINPEWISKVENLNAALNEFKNGKNKDFSKVTQAKSDLENSVKDVIINQKV
TDKVDNLNQAVSVAKATGDFSGVDQALADLKNFSKEQLAQQTQKNESFNVGKKSEIYQSV
KNGVNGTLVGNGLSKAEATTLSKNFSDIKKELNAKLGNFNNNNNNGLKNEPIYAKVNKKK
TGQVVSPEEPIYAQVAKKVNAKIDRLNQIASGLGVVGQAVGFPLKRHDKVDDLSKVGLSA
SPEPIYATIDELDGPFPLKRHDKVDDLSKVGLSASPEPIYATIDELDGPFPLKRHDKVDD
LSKVGLSRERQLKQNIDNLNQAVSEAKAGFFGNLEQTIDKLKDSTKYNSMNLWVESAKKV
PASLSAKLDNYATNSHTRINSNVKNGAINEKATGMLTQKNPEWLKLVNDKIVAHNVGSVP
LLEYDKIGFNQKNMKDYSDSFKFSTRLSNAVKDIKSGFVQFLTNTFSTASYYCLAEENAK
HGIKNANTKGGFQKS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgaaactattgaccaacaaccacaaaccgaagtggcttttaacccgcagcaa
tttatcaataatcttcaagtggcttttcttaaagttgataatgctgtcgcttcatatgat
cctgatcaaaaaccaatcattgataagaacgatagggataacaggcaagcttttaatgga
atctcgcaattaagggaagaatactccaataaagcgatcaaaaatcctaccaaaaagaat
cagtatttttcaagctttatcaataagagcaatgatttaatcaacaaagacaatctcatt
gatgtagaatcttccacaaagagctttcagaaatttggggatcagcgttaccgaattttc
acaagttgggtgtcccatcaagacgatccgtctaaaatcaacacccgatcgatccgaaat
tttatggaaaatatcatacaaccccctatccctgatgataaagaaaaagcagagtttttg
aaatctgccaaacaatcttttgcaggaatcattatagggaatcaaatccgaacggatcaa
aagttcatgggcgtgtttgatgaatccttgaaagaaaggcaagaagcagaaaaaagtgga
gagcctactggtggggattggttggatatttttctctcatttatatttgacaaaaaacaa
tcttctgatgtcaaagaagcaatcaatcaagaaccagttccccatgtccaaccagatata
gccactaccaccaccgacatacaaggtttaccgcctgaatctagggatttgcttgatgaa
aggggtaatttttctaaattcactcttggcgatatggaaatgttagatgttgagggagtc
gctgacattgatcctaattacaagtttaatcaattattgattcacaataacgctctgtct
tctgtgttaatggggagtcataatggcatagaacctgaaaaagtttcattgttgtatgga
aacaatggtggccctgaagctaggcatgattggaacgccaccgttggttataaagaccaa
caaggtaacaatgtggctacaataattaatgtgcatatgaaaaacggcagtggcttagtc
atagcaggtggtgagaaagggattaacaaccctagtttttatctctacaaagaagaccaa
ctcacaggctcacaacgagcattgagtcaagaagagatccaaaacaaagtagatttcatg
gaatttcttgcacaaaataatgctaaattagacaacttgagcgagaaagagaaagaaaaa
ttccaaaatgagattgaagattttcaaaaagactctaaggcttatttagacgccctaggg
aatgatcgtattgcctttgtttctaaaaaagacccaaaacattcagctttaattactgag
tttggtaagggggatttgagctacactctcaaagattatgggaaaaaagcagataaagct
ttagatagggagaaaaatgttactcttcaaggtagcctaaaacatgatggcgtgatgttt
gttgattattctaatttcaaatacaccaacgcctccaagaatcccaataagggtgtaggc
gttacgaatggcgtttcccatttagaagcaggctttagcaaggtagctgtctttaatttg
cctaatttaaataatctcgctatcactagtttagtaaggcgggatttagaggataaacta
atcgctaaaggattgtccccacaagaagctaataagcttgtcaaagattttttgagcagc
aacaaggaattggttggaaaagctttaaacttcaataaagctgtagctgaagctaaaaac
acaggcaactatgatgaagtgaaaaaagctcagaaagatcttgaaaaatctctaaagaaa
cgagagcgtttagagaaagaagtagtgaaaaatttggagagcaaaagcggcaacaaaaac
aaaatggaagcaaaagctcaagctaacagccaaaaagatgagatttttgcgttgatcaat
aaagaggctaatagggatgcaagagcaatcgcttacgctcaaaatcttaaaggcatcaga
agggaactttctgataaacttgaaaatgtcaacaagaatttgaaagactttagtaaatct
tttgatgaattcaaaaatggcaaaaataaggatttcagcaaggcagaagaagcactaaaa
gcccttaaaggctcggtgaaagatttaggtatcaatccagaatggatttcaaaagttgaa
aaccttaatgcagctttgaatgaattcaaaaatggcaaaaataaggatttcagcaaggta
acgcaagcaaaaagcgaccttgaaaattccgttaaagatgtgatcatcaatcaaaaggta
acggataaagttgataatctcaatcaagcggtatcagtggctaaagcaacgggtgatttc
agtggagtagatcaagcgttagccgatctcaaaaatttctcaaaggagcaattggctcaa
caaactcaaaaaaatgaaagtttcaatgttggaaaaaaatctgaaatataccaatccgtt
aagaatggtgtgaatggaaccctagtcggtaatgggttatctaaagcagaagccacaact
ctttctaaaaacttttcggacatcaagaaagagttgaatgcaaaattggggaatttcaat
aacaataacaataatggactcaaaaacgaacccatttatgctaaagttaataaaaagaaa
acagggcaagtagttagccctgaagaacccatttatgctcaagttgctaaaaaggtgaat
gcaaaaattgaccgactcaatcaaatagcaagtggtttgggtgttgtagggcaagcagtg
ggcttccctttgaaaaggcatgataaagttgatgatctcagtaaggtagggctttcagct
agccctgaacccatttatgctacgattgatgagctcgacggacccttccctttgaaaagg
catgataaagttgatgatctcagtaaggtagggctttcagctagccctgaacccatttat
gctacgattgatgagctcgacggacccttccctttgaaaaggcatgataaagttgatgat
ctcagtaaggtagggctttcaagggagcgacaattgaaacagaatattgataatctcaat
caggcggtatcagaagctaaagcaggtttttttggcaacctagagcaaacgatagacaag
ctcaaagattctacaaaatacaattccatgaatctatgggttgaaagtgcaaaaaaagta
cctgctagtttgtcagcgaaactagacaattacgctactaacagccacacacgcattaat
agcaatgtcaaaaatggagcaatcaatgaaaaagcgactggtatgctaacgcaaaaaaac
cctgagtggctcaagctcgtgaatgataagatagttgcacataatgtgggaagcgttcct
ttgttagagtatgataaaattggcttcaaccagaagaatatgaaagattattctgattcg
ttcaagttttccaccaggttgagcaatgctgtaaaagacattaagtctggctttgtgcaa
tttttaaccaatacattttctacagcatcttattactgcttggcggaagaaaatgcgaag
catggaatcaaaaatgctaatacaaaaggtggtttccaaaaatcttaa
DBGET
integrated database retrieval system
