KEGG   Halorubrum ezzemoulense: EO776_04120
Entry
EO776_04120       CDS       T06071                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hezz  Halorubrum ezzemoulense
Pathway
hezz03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hezz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EO776_04120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hezz03021]
    EO776_04120
Transcription machinery [BR:hezz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     EO776_04120
 Prokaryotic type
  Archaeal type
    TFB
     EO776_04120
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Trm112p Zn_ribbon_RPB9 Zn_ribbon_LysW Anti-TRAP DUF8106 DZR HTH_Tnp_ISL3 Cas12f1-like_TNB GFA Zn_ribbon_tTFIIB DUF7129 DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: QAY19230
UniProt: A0A256J7Q7
LinkDB
Position
complement(829886..830860)
AA seq 324 aa
MSERLHTRGSRSRTETNEEESENTDETLSCPECGGHVINDEEHGETVCSDCGLVVEADSV
DRGPEWRAFDSREKDEKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGRSLGARQRQKMQRL
RKWNERFRTRDSKERNLKQALGEIDRMASAQGLPDNVRETASVIYRRALDEDLLPGRSIE
GVSTSCVYAAARMAGVPRSLDEIADVSRVEKAEIARTYRYVVRELKLEVKPADPEQYVPR
FASDLELSEESEMRAKSLLRNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEV
ADISEVTIRNRYHELLEAEDGLVA
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagtgaacgactacacacacgggggagtcgctcccgaacggagacgaacgaggaggaa
tcggagaacacggacgagacgctcagctgcccggagtgcggcgggcacgtcatcaacgac
gaggaacacggggagaccgtctgcagcgactgcgggctcgtcgtcgaggcggactcggtc
gaccgcggcccggagtggcgcgcgttcgactcccgcgagaaggacgagaagagccgcgtc
ggcgccccgacgacgaacacgatgcacgacaaggggctctcgacgaacatcgactggcgc
gacaaggacgcgtacggccggtcgctcggcgcgcgccagcgccagaagatgcagcggctc
cgcaagtggaacgagcggttccgcacccgcgactccaaggagcgcaacctgaagcaggcg
ctcggcgagatcgaccgcatggcgagcgcgcaggggctcccggacaacgtccgcgagacg
gcctcggtcatctaccgacgcgcgctcgacgaggacctgctccccggtcgctccatcgag
ggcgtctccacctcctgcgtgtacgccgccgcccggatggccggcgtcccgcgcagcctc
gacgagatcgccgacgtgtcgcgcgtcgagaaggctgagatcgcgcggacgtaccgctac
gtcgtccgcgaactgaagctcgaagtgaagccggccgaccccgagcagtacgtcccccgg
ttcgcctccgacctcgaactgagcgaggagtcggagatgcgcgcgaagagcctcctccgc
aacgccaaggagaagggcgtccactcgggtaagtcgccggtgggcctcgccgcggccgcc
gtctacgccgccgcgctcctcacgaacgagaagacgacgcaggccgccgtctcggaggtc
gccgacatctccgaggtcaccatccggaaccggtaccacgagctgctggaggccgaggac
ggcctcgtcgcgtaa

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