Halorubrum ezzemoulense: EO776_11980
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Entry
EO776_11980 CDS
T06071
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hezz
Halorubrum ezzemoulense
Pathway
hezz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hezz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EO776_11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hezz03019
]
EO776_11980
Messenger RNA biogenesis [BR:
hezz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EO776_11980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QAY20678
UniProt:
A0A256KA83
LinkDB
All DBs
Position
complement(2370679..2372031)
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AA seq
450 aa
AA seq
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MEIEIATLGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNVETESMHSLDLIDMGA
IPDDRVMSELEGDVQAIVPTHGHLDHIAGIPKLAHRYDAPIVSAPYTIELVRQQIEDEGK
FQVDNDLVKMKPGATMAIGDSEQVEMEFVNVTHSIIDAINPVIHTPEGAIVYGLDKRLDH
DPVIGDPIDMERFREIGRQDEGVLCYVEDCTNAGRKGRTPSESYAKKHVEDTFKSMEDYT
GGIVATTFSSHIARVKTLVEYAREIGRQPVLLGRSMEKYSGTAERLDFVDFQGDVGMYGH
RKSVDRAFKRIMKEGKGNFLPIVTGHQGEPRAMLTRMGRGETPYEIDDGDKIVFSASVIP
EPTNEGQRYQSEQLLRMQGARLYDDIHVSGHLREEGHYEMLDALQPQHVIPGHQSLEGRS
PYVNLATSQGYKLGRDVHVTQNGSVIQLVE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgaaattgcgacactcggcggttacgaagaggtcggtcgacagatgacggcg
gttcgcgcgggcgacgacatcgtcatcttcgacatgggcctgaacctcagtaaggtcctc
atccacgacaacgtggagaccgagagcatgcacagcctcgatctgatcgacatgggcgca
atcccggacgaccgggtcatgagcgaactggagggcgacgtccaggcgatcgtccccacc
cacggccacctcgaccacatcgcggggatcccgaagctcgcccaccgctacgacgcgccg
atcgtctccgcgccgtacacgatcgaactggtgcgccagcagatcgaagacgagggcaag
ttccaggtggacaacgacctcgtgaagatgaagcccggcgccacgatggcgatcggcgac
tccgagcaggtcgagatggagttcgtcaacgtcacccactcgatcatcgacgcgatcaac
ccggttattcacaccccggagggcgcgatcgtctacgggctcgacaagcggctggaccac
gaccccgtcatcggcgacccgatcgacatggagcggttccgcgagatcgggcggcaggac
gagggcgtcctctgttacgtcgaggactgtacgaacgccggccggaagggccgcacgccc
tccgagtcgtacgcgaagaaacacgtcgaggacacgttcaaatcgatggaggactacacc
ggcggcatcgtcgccacgacgttctcctcccacatcgcccgcgtgaagaccctcgtcgag
tacgctcgcgagatcggccgccagccggtcctcctcgggcgctcgatggagaagtactcc
ggcacggccgagcggctcgacttcgtcgacttccagggcgatgtcggcatgtacggccac
cgcaagtccgtcgaccgcgcgttcaagcggatcatgaaggaggggaaggggaacttcctc
cccatcgtgacgggccaccagggcgagccgcgcgcgatgctcacccgcatgggtcgcggc
gagacgccgtacgaaatcgacgacggcgacaagatcgtcttcagcgccagcgtcatcccg
gagcccaccaacgagggccagcgctaccagtccgaacagctgctccggatgcagggcgcg
cgcctctacgacgacatccacgtctccgggcacctccgcgaggagggccactacgagatg
ctcgacgcgctccagccgcagcacgtgatcccgggccaccagtcgctcgagggccggtcg
ccgtacgtgaacctcgcgacgtcgcaggggtacaagctcggacgtgacgtccacgtcacg
cagaacgggagcgtcatccagctcgtcgaatga
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