KEGG   Halorubrum ezzemoulense: EO776_11980
Entry
EO776_11980       CDS       T06071                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
hezz  Halorubrum ezzemoulense
Pathway
hezz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hezz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EO776_11980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hezz03019]
    EO776_11980
Messenger RNA biogenesis [BR:hezz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EO776_11980
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: QAY20678
UniProt: A0A256KA83
LinkDB
Position
complement(2370679..2372031)
AA seq 450 aa
MEIEIATLGGYEEVGRQMTAVRAGDDIVIFDMGLNLSKVLIHDNVETESMHSLDLIDMGA
IPDDRVMSELEGDVQAIVPTHGHLDHIAGIPKLAHRYDAPIVSAPYTIELVRQQIEDEGK
FQVDNDLVKMKPGATMAIGDSEQVEMEFVNVTHSIIDAINPVIHTPEGAIVYGLDKRLDH
DPVIGDPIDMERFREIGRQDEGVLCYVEDCTNAGRKGRTPSESYAKKHVEDTFKSMEDYT
GGIVATTFSSHIARVKTLVEYAREIGRQPVLLGRSMEKYSGTAERLDFVDFQGDVGMYGH
RKSVDRAFKRIMKEGKGNFLPIVTGHQGEPRAMLTRMGRGETPYEIDDGDKIVFSASVIP
EPTNEGQRYQSEQLLRMQGARLYDDIHVSGHLREEGHYEMLDALQPQHVIPGHQSLEGRS
PYVNLATSQGYKLGRDVHVTQNGSVIQLVE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggaaatcgaaattgcgacactcggcggttacgaagaggtcggtcgacagatgacggcg
gttcgcgcgggcgacgacatcgtcatcttcgacatgggcctgaacctcagtaaggtcctc
atccacgacaacgtggagaccgagagcatgcacagcctcgatctgatcgacatgggcgca
atcccggacgaccgggtcatgagcgaactggagggcgacgtccaggcgatcgtccccacc
cacggccacctcgaccacatcgcggggatcccgaagctcgcccaccgctacgacgcgccg
atcgtctccgcgccgtacacgatcgaactggtgcgccagcagatcgaagacgagggcaag
ttccaggtggacaacgacctcgtgaagatgaagcccggcgccacgatggcgatcggcgac
tccgagcaggtcgagatggagttcgtcaacgtcacccactcgatcatcgacgcgatcaac
ccggttattcacaccccggagggcgcgatcgtctacgggctcgacaagcggctggaccac
gaccccgtcatcggcgacccgatcgacatggagcggttccgcgagatcgggcggcaggac
gagggcgtcctctgttacgtcgaggactgtacgaacgccggccggaagggccgcacgccc
tccgagtcgtacgcgaagaaacacgtcgaggacacgttcaaatcgatggaggactacacc
ggcggcatcgtcgccacgacgttctcctcccacatcgcccgcgtgaagaccctcgtcgag
tacgctcgcgagatcggccgccagccggtcctcctcgggcgctcgatggagaagtactcc
ggcacggccgagcggctcgacttcgtcgacttccagggcgatgtcggcatgtacggccac
cgcaagtccgtcgaccgcgcgttcaagcggatcatgaaggaggggaaggggaacttcctc
cccatcgtgacgggccaccagggcgagccgcgcgcgatgctcacccgcatgggtcgcggc
gagacgccgtacgaaatcgacgacggcgacaagatcgtcttcagcgccagcgtcatcccg
gagcccaccaacgagggccagcgctaccagtccgaacagctgctccggatgcagggcgcg
cgcctctacgacgacatccacgtctccgggcacctccgcgaggagggccactacgagatg
ctcgacgcgctccagccgcagcacgtgatcccgggccaccagtcgctcgagggccggtcg
ccgtacgtgaacctcgcgacgtcgcaggggtacaagctcggacgtgacgtccacgtcacg
cagaacgggagcgtcatccagctcgtcgaatga

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