Humidisolicoccus flavus: U2H20_00480
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Entry
U2H20_00480 CDS
T11070
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hfa Humidisolicoccus flavus
Pathway
hfa03420
Nucleotide excision repair
hfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U2H20_00480
03430 Mismatch repair
U2H20_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfa03400
]
U2H20_00480
Enzymes [BR:
hfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U2H20_00480
DNA repair and recombination proteins [BR:
hfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U2H20_00480
MMR (mismatch excision repair)
Other MMR factors
U2H20_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WTM64718
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All DBs
Position
99260..102559
Genome browser
AA seq
1099 aa
AA seq
DB search
MHQISPEMIAQALGKSFAPTPEQRAVITAPLEPALVVAGAGSGKTETMSQRVLWLVANGL
VAPEQILGLTFTKKAAGELQSRIALQLRQLRSWQRANGISFVQAQNQAQNGANSAGAGGG
AHATNTSSASGSPSLPELDFAVPTISTYNAFADRIFRDNALIVGRDPNAELIGDSAAWLL
AREVARASTNERLADLDKNESGVAELILRLTAALGDNVVDVQRLAGFGEQLLAVLDLPET
EPGERALSATKRALVERLFSSQKNLSDLSELAVAFDEEKRKRGLTQFSDQVRFALAAAEA
DSRVGETLRTQYRVVLLDEYQDTSVVQIRLLTTLFAGAPVMAVGDPNQSIYGWRGASAET
LQRFARDFSATLRFSLTTSWRNSSQILEVANHTVKALPAGGVDTLQPSPSAGAGRVTIRH
EETLDQEIETVADWVLDQRQQSGEISAAILLRTKKHMRRFADALEARGIPVQVAGVDALF
DEPEIADITSALRVVSDPDANNALLRLLAGARWRIGPKDLWELGSYARLLQRRGLDGKQL
SDELQAKLRASTASDAHESLVDALDELSRNTGGAAVLERFSEQGLLRMQEAGRLFADLRR
HAGLPLIEFIRLVERRLHLDIELAANPGRRRGRANLDAFLSEVQSFTASDSLGTLGSLVS
WLDRAENSKSEMQTPSVTPAPGVVQILTVHGAKGLEWDAVAVPCLVNGSFPTSLKFINGW
LRLGELPYEFRGDRDALPQLQWRSLATQHEAHDAITQLQEQNKANALEEERRLAYVAFTR
ARHSLLLSASTWSVNVKPHAPSIFLEESAALLGQELRPEPEKGAENPVSLETQVEVWPRD
PLGKRRARIEAAAQMIAEQPDNAPHRWSELVDRLLDERARNERNEQHRNVPERIAASGFK
DWVADPLARASVAARPLPQRPFRATRLGTLFHEWVETRATSSFGLSDHDPDLFSTDVDDE
ELVAVDGARLATLRATFERSKYATLTPLETEIEIHALLGEQVVVCKLDAVFAEGDGILVV
DWKTGKLPQSDHDLAERAAQLALYRVAYSQYSGRALEDISAEFYFVEYDTIIRPDALMTE
SELTALWATTTRRILGERP
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccaaatttcacccgagatgatcgcccaggcgctgggaaagtcattcgcaccgacg
ccagaacagcgggccgtgatcaccgctccactcgaaccggcgctcgtggtcgctggcgct
ggaagtggcaagaccgaaaccatgtcgcaacgagtgttgtggctcgttgcaaacgggctc
gtcgcccccgagcagattttgggtcttacgttcacaaagaaagccgccggggaattgcaa
tcacgaattgcgttgcagcttcggcagctgcggtcatggcaacgcgcgaacggtatctcg
ttcgttcaagcgcagaatcaagcgcagaatggtgcgaattcagcaggcgccggcggtggc
gcgcacgcgaccaacacgtcctcagcctctggcagcccatcactgcccgaactcgacttc
gcggttccaacgatctcgacgtacaacgccttcgccgatcggatcttccgagacaatgcg
ctcatcgtcgggcgcgaccccaacgccgaactcattggtgactccgcagcctggttgctc
gctcgtgaggtcgcccgagcaagcacgaacgaacggcttgcagacctcgataagaacgag
tcgggtgtcgctgagctcatccttcgcctgaccgcggcccttggtgacaacgtcgtggac
gtgcaacgtctggcagggttcggggagcaactgctcgcggtgcttgacctgccagaaacc
gaaccgggggaacgcgcgctctccgcgacgaagcgcgcgctcgtcgaacgactgttctcg
agtcagaagaatctctccgacctgagtgaactcgcagttgccttcgacgaggagaaacgc
aaacgcggccttacccaattcagcgaccaggttcgttttgcgctcgccgctgcagaagcg
gacagccgagtgggcgagaccttgcgaacgcagtaccgagtggtgctcctcgacgagtat
caagacacttccgtcgtgcagatccgactgctgacgacgctcttcgccggcgctcccgtc
atggcggtgggcgatccaaaccagtcgatctacggctggcgaggagcgagcgcggaaacg
ctgcagcggtttgctcgagatttctccgccacattgcgattctcgctcacgacgagctgg
cggaacagctcccagatccttgaagttgcgaatcacacggtcaaagcgctccctgccggt
ggggtcgacactctgcagccgagcccgagtgcgggcgccggtcgagtaacgatccggcac
gaggaaacactcgatcaagagattgagacggtcgcagactgggtcctcgaccaacgtcag
cagtccggtgagatcagtgcggcgattctgctccgcaccaagaagcacatgcgccgattc
gcagatgcactcgaagctcggggcatccccgtgcaggttgctggcgtggacgcactcttc
gacgagccggagatcgccgacatcacgagcgcgctccgggttgtttcagaccccgatgcg
aacaatgctctgttgcggctcctcgccggagcccgctggcggatcggaccaaaagacctc
tgggagctcgggagctacgcgcgtcttctgcagcgccgaggtcttgacggcaagcagttg
agcgacgaattgcaagcgaagctgcgcgcttcaaccgcaagtgacgcgcatgagtcgctc
gtcgatgcgctcgacgaactcagccgaaatactggtggcgctgcggtgctcgaacgcttc
agcgagcaaggactccttcggatgcaggaggcgggtcggctgttcgcggaccttcgacgc
catgccggtctcccgctgatcgaattcattcgactcgtcgaacgacgactccacctcgac
atcgaactcgcggcgaaccccggtcgccggcgcggtcgcgccaacctcgatgcgttcctc
agtgaagtacagagctttactgcctccgactcgctcggaaccctcggatcgctcgtttcc
tggctcgaccgcgcggaaaacagcaaaagcgaaatgcaaacaccgagtgtgacgcccgcg
ccaggggtcgttcagatcttgaccgtgcacggcgcgaaaggtctcgagtgggacgccgtg
gcagtgccgtgtctcgtgaacgggagctttccgacttctttgaaattcatcaacggatgg
ctccggctcggtgaactcccgtatgagttccgaggagaccgcgacgctctgcctcagttg
cagtggcgttcgctcgcgactcagcacgaggcgcacgacgcgatcacgcaactgcaagag
cagaataaggcgaatgcgctcgaagaagagcgccgtctcgcatatgtcgcgttcactcgt
gctcgtcactccctcttgttgagcgcatcgacctggagtgtcaacgtaaaaccgcacgca
cccagcatcttcctcgaggagagcgcggcgcttctcgggcaggaactccgaccggaaccc
gaaaagggcgctgaaaacccggtgagtctcgaaactcaggtcgaagtctggccgagggat
ccgctcggcaagcggcgtgctcgcattgaagcagcagcgcagatgatcgcagagcaaccc
gacaacgcaccgcatcgctggagcgaacttgtcgatcgtctcctcgacgagcgtgcacgc
aatgagcgcaacgaacagcatcgcaatgttccagagcgaatcgctgcctcagggttcaaa
gactgggttgctgacccgcttgcccgtgcctccgttgccgcgcgcccgctcccacagcga
ccatttcgagcgaccaggctcggcacgctgttccacgaatgggtagagacccgagcgacg
tcgtcattcggcctcagcgatcacgatccggacctgttttcgacggacgtcgacgatgaa
gaactcgtggcggtcgacggcgcacgactcgcaacacttcgggcgacattcgagcgatcg
aaatatgccactctgacccctcttgaaaccgagatcgagattcatgcgctcttgggtgag
caagttgtcgtgtgcaagctcgatgcggtgtttgccgagggtgacgggatcctggtggtc
gactggaagaccggcaagcttcctcagagcgatcacgacctcgcggagagagccgcgcaa
ctcgcgctctaccgggttgcgtactcgcagtacagcggacgggcactcgaggacatctcc
gcggagttctacttcgtcgaatacgacacgatcatccgcccagatgcgctgatgaccgaa
tccgaactcactgcgctctgggcaacgacaactcgacgcattcttggagaacgaccgtga
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integrated database retrieval system
