KEGG   Humidisolicoccus flavus: U2H20_02150
Entry
U2H20_02150       CDS       T11070                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
hfa  Humidisolicoccus flavus
Pathway
hfa02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hfa00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    U2H20_02150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hfa03021]
    U2H20_02150
Transcription machinery [BR:hfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U2H20_02150
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DBD_HTH Fer4_19 HTH_20
Other DBs
NCBI-ProteinID: WTM65015
LinkDB
Position
449180..450568
AA seq 462 aa
MATRATKTASEKALAAKAEKPAAATAAATKETKAKITKATPAAKAPAAKKTTAATPAAKA
PAKKAATKKAPATKAAAAKALAAEEATTSVAATTPAAAPKRRGRAKAAPEVLEADTEVVE
EETAEPEEPSEEVQKLPSGALVLSSTDDDEVPVYSTTITGATADPVKDYLKQIGKVALLN
AAEEVELAMRIEAGLFAEDKLANSDDLPKKLLRELRAIARDGQRAKSHLLGANLRLVVSL
AKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTI
RIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELDMTPEKVVEVQKYGREPISLHTP
LGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIKMRFGLGDGMP
KTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQALRDYLE
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcgacacgcgcaacgaagacagcgagcgaaaaagctcttgcagcgaaggccgagaag
cccgcagcagcaactgcggcggcgacgaaagaaacgaaggcaaagattacgaaggcaact
cccgccgcgaaagcgccggcggcgaaaaagacgactgctgcaactccagcagcgaaggca
cctgccaagaaggctgctacgaagaaggctcctgccacgaaggcagcagccgcgaaggct
ctcgcagcagaggaggccaccacttcggtcgccgcaaccactcctgctgcagctccaaag
cgtcgtgggcgtgcaaaggcggcgcccgaggtgctcgaagctgacaccgaggtcgtcgag
gaagaaaccgctgagccggaagagccgagcgaagaagtgcagaagcttccttctggcgct
ctcgtgctctcgagcactgatgacgatgaagttccggtgtactcgacgacgatcacgggt
gcgaccgcagacccggtcaaggactatctgaagcagatcggtaaagtcgctcttctgaat
gcagcagaagaggtcgaacttgctatgcgtatcgaggcaggcctgttcgccgaggacaaa
cttgcgaacagtgatgaccttccgaagaagttgttgcgcgaactgcgggccatcgcacgt
gacggtcagcgtgcgaagagccacctcctgggcgccaacctgcgtctggtcgtgagcctc
gcgaagcgctacacgggccgaggaatgcagttcctcgacctcattcaagaaggaaacctc
ggtctcattcgcgcagtcgagaagttcgactacacgaagggcttcaagttctctacgtac
gcgacctggtggatccgccaggcaatcactcgtgcgatggcggaccaggcgcgcacgatt
cgtattcctgtgcacatggtcgaggtcatcaacaagctcgctcgtgtgcagcggcaaatg
ctgcaggatctcggtcgtgaaccgacgccggaagagcttgcccgcgagcttgatatgacg
cctgagaaggtcgtcgaggtgcagaagtatgggcgtgagccgatttcgctccacacccca
ttgggcgaggacggcgacagcgaattcggtgacctcatcgaagacaccgaagcagttgtt
cctgcggacgcagttggcttcacaatgttgcagcgtcagcttgagtcactgctcgactcg
ctctcagagcgtgaggctggtgtgatcaagatgcgcttcggccttggcgacggcatgccg
aagacgctcgaccagatcggcgacaccttcggcgtaactcgcgaacggatccgtcagatc
gaatcgaagacgatggcgaagcttcgccacccttcacggtcgcaggcacttcgcgactac
ctcgaataa

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