Humidisolicoccus flavus: U2H20_02150
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Entry
U2H20_02150 CDS
T11070
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
hfa Humidisolicoccus flavus
Pathway
hfa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hfa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U2H20_02150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfa03021
]
U2H20_02150
Transcription machinery [BR:
hfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U2H20_02150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DBD_HTH
Fer4_19
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WTM65015
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All DBs
Position
449180..450568
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AA seq
462 aa
AA seq
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MATRATKTASEKALAAKAEKPAAATAAATKETKAKITKATPAAKAPAAKKTTAATPAAKA
PAKKAATKKAPATKAAAAKALAAEEATTSVAATTPAAAPKRRGRAKAAPEVLEADTEVVE
EETAEPEEPSEEVQKLPSGALVLSSTDDDEVPVYSTTITGATADPVKDYLKQIGKVALLN
AAEEVELAMRIEAGLFAEDKLANSDDLPKKLLRELRAIARDGQRAKSHLLGANLRLVVSL
AKRYTGRGMQFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTI
RIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELDMTPEKVVEVQKYGREPISLHTP
LGEDGDSEFGDLIEDTEAVVPADAVGFTMLQRQLESLLDSLSEREAGVIKMRFGLGDGMP
KTLDQIGDTFGVTRERIRQIESKTMAKLRHPSRSQALRDYLE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgcgcaacgaagacagcgagcgaaaaagctcttgcagcgaaggccgagaag
cccgcagcagcaactgcggcggcgacgaaagaaacgaaggcaaagattacgaaggcaact
cccgccgcgaaagcgccggcggcgaaaaagacgactgctgcaactccagcagcgaaggca
cctgccaagaaggctgctacgaagaaggctcctgccacgaaggcagcagccgcgaaggct
ctcgcagcagaggaggccaccacttcggtcgccgcaaccactcctgctgcagctccaaag
cgtcgtgggcgtgcaaaggcggcgcccgaggtgctcgaagctgacaccgaggtcgtcgag
gaagaaaccgctgagccggaagagccgagcgaagaagtgcagaagcttccttctggcgct
ctcgtgctctcgagcactgatgacgatgaagttccggtgtactcgacgacgatcacgggt
gcgaccgcagacccggtcaaggactatctgaagcagatcggtaaagtcgctcttctgaat
gcagcagaagaggtcgaacttgctatgcgtatcgaggcaggcctgttcgccgaggacaaa
cttgcgaacagtgatgaccttccgaagaagttgttgcgcgaactgcgggccatcgcacgt
gacggtcagcgtgcgaagagccacctcctgggcgccaacctgcgtctggtcgtgagcctc
gcgaagcgctacacgggccgaggaatgcagttcctcgacctcattcaagaaggaaacctc
ggtctcattcgcgcagtcgagaagttcgactacacgaagggcttcaagttctctacgtac
gcgacctggtggatccgccaggcaatcactcgtgcgatggcggaccaggcgcgcacgatt
cgtattcctgtgcacatggtcgaggtcatcaacaagctcgctcgtgtgcagcggcaaatg
ctgcaggatctcggtcgtgaaccgacgccggaagagcttgcccgcgagcttgatatgacg
cctgagaaggtcgtcgaggtgcagaagtatgggcgtgagccgatttcgctccacacccca
ttgggcgaggacggcgacagcgaattcggtgacctcatcgaagacaccgaagcagttgtt
cctgcggacgcagttggcttcacaatgttgcagcgtcagcttgagtcactgctcgactcg
ctctcagagcgtgaggctggtgtgatcaagatgcgcttcggccttggcgacggcatgccg
aagacgctcgaccagatcggcgacaccttcggcgtaactcgcgaacggatccgtcagatc
gaatcgaagacgatggcgaagcttcgccacccttcacggtcgcaggcacttcgcgactac
ctcgaataa
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