Humidisolicoccus flavus: U2H20_02650
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Entry
U2H20_02650 CDS
T11070
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hfa Humidisolicoccus flavus
Pathway
hfa03030
DNA replication
hfa03410
Base excision repair
hfa03420
Nucleotide excision repair
hfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U2H20_02650 (polA)
03410 Base excision repair
U2H20_02650 (polA)
03420 Nucleotide excision repair
U2H20_02650 (polA)
03440 Homologous recombination
U2H20_02650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfa03032
]
U2H20_02650 (polA)
03400 DNA repair and recombination proteins [BR:
hfa03400
]
U2H20_02650 (polA)
Enzymes [BR:
hfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U2H20_02650 (polA)
DNA replication proteins [BR:
hfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U2H20_02650 (polA)
DNA repair and recombination proteins [BR:
hfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
U2H20_02650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U2H20_02650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
AlphaC_N2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WTM65104
LinkDB
All DBs
Position
554530..557145
Genome browser
AA seq
871 aa
AA seq
DB search
MVIDGHSLAFRAFFALPVDSFVNDKGQHTNAIHGFISMLLSLLNKEQPTHLAVAFDISRF
SFRTREYPEYKGTRAETPAEFKGQIPLLEESLHAMGIRTLSKEDFEADDILATLSVEGRK
AGFKVLVVSGDRDTIQLVNEDVTLLYPAARGVSELKRYTPEAVRERYGIEPEQYPEIAAL
VGETSDNLVGIDKVGEKTAVKWVQQYGSVDEILKHADDIKGVVGNNLREQSDRALRNRRL
NRLLTDVDLGVKPEELLRGTIDPEAVTEVFHRLKFRTLLERVLKLAGADAPAAPVSTVTA
PAVHKMVDEELTTWLERLDEEVVVLAETAGEELLGFGLATASSSVHVPFAAGTGDYEGLS
SWLESDAPKVLHDAKHQLPVLTNAGFTVRGVVFDTRIAASLLTPGAPPKNFTLENIVDRE
LLETIPTPDPDQLVPDTAAGEIATRAWFVARVAEAQRAKLDAGSLKVLEEIELPAVPVLI
AMEQQGITVDAAVLDQLQQRLRTLASEHQAAAFEAIGHEVNLGSPKQLQTVLFEELEMPK
TRATKTGYSTDAAALADLQQSNPHPFLDLLLQHRDATKLAQMIETLQRSLQDDGRIHTSY
DQVGTATGRISSNDPNLQNIPVRAAVGREIRAAFVHGSEFETLLTADYSQIEMRIMAHLS
GDEGLIEAFRSGEDLHRFVGARIFSVEPEDVTNEMRSKVKAMSYGLAYGLSAFGLAKQLR
ITNAEAKQLMVDYFTRFGAVRDYLRGVVAQAKDDSYTQTIFGRRRPFPDLSSTNRVAREN
AERAALNSPIQGSAADIMKIAMLRVAQGMADAKLRSKMLLQVHDELVFEVAAGELEALQE
IVKDGMQGAAELSVPLEIAIGIGANWDEAAH
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggtcattgatggccactctcttgcctttcgcgctttttttgcgctccctgtcgacagt
tttgttaacgacaaggggcagcacaccaacgcgattcacggcttcatctcgatgttgctc
tcactcctgaacaaggagcaaccgacccatctcgcggtggccttcgatatatctcggttt
tcattccgcacgcgcgagtaccccgagtacaagggcactcgagcagagacgccggccgag
ttcaaaggccagatcccgctccttgaagagtcccttcacgcaatggggatccgcaccctc
agtaaagaagacttcgaagccgacgacatccttgccacactgagcgtcgaaggccgaaaa
gctggcttcaaagtgctcgtggtctcgggcgaccgcgacaccatccagctcgtcaatgaa
gacgtcacgctcttgtatccggcggctcgcggcgtttcagaactcaagcgctacaccccg
gaggctgtccgcgagcggtacggcatcgagccggagcagtatccggaaatcgctgcgctg
gtcggtgaaacgagcgacaaccttgtcggtatcgacaaagtcggcgaaaagacagcggtc
aagtgggtccagcagtacggatccgtcgacgagattctgaagcacgctgacgacattaag
ggcgttgttggaaacaacctgcgtgagcagtcagaccgcgcgcttcgaaaccgtcgcctc
aatcgcctgctgaccgatgtcgacctgggcgtcaagcccgaagaactgcttcgtggcacg
atcgacccagaagcggtcactgaggttttccatcgtctaaagttccgaacgctgctcgag
cgcgtgctcaagctcgcgggcgccgatgctccggcagcgccggtctccacggtgactgcg
ccggcggtgcacaagatggtcgacgaggagctgaccacctggctcgagcgtctcgacgaa
gaagtcgttgttcttgcagagaccgctggcgaagagcttcttgggtttgggctcgcgacc
gcgtcatcgagcgtgcatgttccattcgcggccggcacgggtgattacgagggtctttcc
tcgtggctcgaatcggacgccccaaaggtcttgcacgacgcgaagcatcagctcccggtg
ctcacgaacgcgggattcacagtgcgcggtgtcgtcttcgacacccggatcgctgcatca
ctgttgactcctggtgcaccaccgaagaatttcacgctcgagaacatcgtcgaccgcgaa
ctcctcgaaacgatcccgacccccgatccagaccagctcgtgccagacaccgctgcaggt
gagatcgcaactcgcgcgtggttcgtcgcgagagtcgccgaggcgcaacgcgcgaagctc
gacgctggctcgctcaaggtgctcgaagaaatcgaattgcccgcggtgcccgttctgatc
gccatggagcagcagggcatcacggtcgacgctgcagtgctcgaccaattgcagcaacga
cttcgcacgctggcgtccgaacaccaagcggccgctttcgaagcgatcggacatgaggtc
aacctcggtagcccgaagcaactgcagacggtgctgttcgaagagctcgagatgccaaag
acccgtgcgacgaaaaccgggtactcgaccgatgcggctgcactggccgatcttcagcag
agcaatccgcacccattcctcgatctcctgctccagcaccgcgacgcaaccaaactcgcg
caaatgatcgagactctgcaacgctcgctgcaggacgacggccgcatccacacttcctac
gaccaagtgggcaccgcgaccggtcgaatctcatcgaacgaccctaacctgcagaacatc
ccggttcgggcagcggtcggaagagagatccgcgccgcgttcgtgcacggatcagagttc
gagaccttgctcaccgctgactattcgcagatcgaaatgcgaatcatggcgcatctctct
ggtgatgaggggctgatcgaggccttccgatctggcgaagacctgcaccggttcgtgggc
gcacggatcttctccgttgagccggaagacgtgacgaacgaaatgcgctcgaaggtcaag
gcaatgagctatggccttgcatatgggctcagcgccttcggactcgcaaagcaattgcgc
atcaccaacgcagaagcgaaacagttgatggtcgattacttcaccaggttcggtgctgtt
cgcgattaccttcgcggagtggtcgcacaagcgaaggacgactcctacacccagacgatt
ttcggtcgtcgtcgtccgttccctgatctttcttcaaccaaccgagtggcgcgcgagaac
gcggaacgtgcagccttgaactctccgatccagggttcggcggcagacatcatgaagatc
gcgatgcttcgtgttgcgcaaggcatggccgatgcgaagctgcgatccaaaatgttgctc
caggtccacgacgaactcgttttcgaggtcgctgccggtgaactcgaagccttgcaagag
atcgtcaaagacggcatgcagggcgccgcggaactcagcgttcctctcgaaatcgcgatc
ggtatcggcgcgaactgggacgaggcagctcattga
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