Humidisolicoccus flavus: U2H20_10815
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Entry
U2H20_10815 CDS
T11070
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hfa Humidisolicoccus flavus
Brite
KEGG Orthology (KO) [BR:
hfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfa03032
]
U2H20_10815 (topA)
03400 DNA repair and recombination proteins [BR:
hfa03400
]
U2H20_10815 (topA)
Enzymes [BR:
hfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U2H20_10815 (topA)
DNA replication proteins [BR:
hfa03032
]
Prokaryotic type
DNA Topoisomerases
U2H20_10815 (topA)
DNA repair and recombination proteins [BR:
hfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U2H20_10815 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Extensin_1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WTM65779
LinkDB
All DBs
Position
2248755..2251502
Genome browser
AA seq
915 aa
AA seq
DB search
MSEGNKLVIVESPAKGKTIEQYLGAGYTVLASVGHIRDLVSPKELPAELKKGPYGKFAVD
IENGFEPYYVVNSEKKKTVADLKRALKDADELILATDEDREGEAIAWHLLQVLQPKVPVK
RMVFHEITKDAIERAKNATRDLNTELVDAQETRRILDRLYGYEVSPVLWRKVRRGLSAGR
VQSPTTRLIVDRERERMAFVAAPYWSLAGRFSARGQNFNARLVRLDGERVATGSDFDDRG
AVKANRIVLDEARSERLANALKRTEFTVSGIESKPYRRKPSAPFTTSTLQQESGRKLRFS
AKQTMSVAQSLYENGYITYMRTDSISLSSQAIQAARGEAERLYGKSSLPDSPRTYASKSK
NAQEAHEAIRPAGDTFRTPSTLEKKLTTNEFRLYDLIWKRTVASQMIDATGKTATITLAS
SATDEGRAEFTAAGTVITEPGFLHAYEEGKDESRYSNESDQQTTLPPVDENEQVDLEELE
RKDHVTSPPPRYTEASLVKALEELGIGRPSTYASIIDTIVRRGFVVQKGSALVPQWIAFA
TMNLLEEHLGKFVEYDFTAEMENDLDRIASGEADRVDWLKGFYYGREGNEGLHSVVDNLG
EIDAKAINSIPVAEGIMLRVGQYGPYLEGVDEAGERKTANVPEELAPDELTEQLAIELFN
APPQEDRVLGQHPVTHKTVVVKDGRFGPYVTELEPEPEASTPEAEDAKPKKKAAKAPKPR
TGSLFKTMTIDEIDLDTAVKLLDLPRVVGLDPESGEEILARNGRFGPYITKGEESRSLDS
EDQIFAIDLEGALERLAQPKYGARRAASALKEFDADPVSGKPIKVKDGRFGPYVTDGTTN
ATIPRGEDVEAVTFERAVELLQIKRDKGPAKKPAAKKPAAKKPAAKKPAAKKPAAKKPAA
KKPAAKKSTTSETTE
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaaggcaacaagcttgtaatcgttgagtccccggcgaaagggaagacgattgag
cagtacctcggagcgggctacacagtgctcgcttcggtcggacacatccgagaccttgtc
agcccaaaagagctgcccgctgaactcaagaagggcccctacggcaagttcgccgttgac
atcgagaacggcttcgagccgtactacgtggtcaactccgagaagaagaagacagtcgca
gacctcaaacgtgcgctgaaagacgccgatgagctcatcctcgcaactgatgaggaccgc
gaaggagaagccatcgcgtggcacctgctgcaagtcctgcagccgaaggtgcccgtcaag
cgcatggtgttccacgaaatcacgaaagacgcgatcgaacgcgcgaaaaacgcgactcgc
gacctcaacaccgaactcgtcgacgcgcaggaaacacgtcgaatcctcgaccgcctctat
gggtacgaggtttcgccggtgctctggcgcaaggtccgccggggcctctccgccggtcga
gtacagtccccgacgacgcggctcatcgtcgaccgcgagcgtgaacgcatggcgttcgtt
gccgccccgtactggagtcttgcaggccgcttcagcgctcgcggccagaacttcaatgcc
cgcctcgtccgcctcgacggcgaacgggtcgcgacaggcagcgacttcgacgaccgcggt
gcagtcaaagcaaaccggatcgtgctcgatgaggcgcgcagcgaacgactcgcgaacgct
ctgaaacgcacggagttcaccgtttccggtatcgagtcgaagccataccgccgcaagccg
agcgcacccttcacgacctcgacactccagcaagagtcgggccggaagttgcgcttcagt
gcgaagcagaccatgagtgttgcgcagtcgctgtacgaaaacgggtacatcacctatatg
cgtaccgactccatttcgctctcctcgcaggcaatccaggcagcacgtggagaagcggag
cggctgtacggcaagtcatcgctgccggattctccgcgcacctacgcgagcaagtcgaag
aacgcgcaggaggcgcacgaagcgattcgtcccgcgggcgacaccttcaggaccccctcg
acgctcgaaaagaagctgacgaccaacgagttccgcctctacgacctcatctggaagcgc
actgttgcctcacagatgatcgacgcgaccggaaagaccgccacgatcacgctggcatcc
tccgcaaccgacgagggtcgtgccgagttcaccgctgcgggaaccgtcatcaccgagccc
ggcttcctgcacgcctatgaagagggcaaggacgagtcgcgctactcgaacgagagcgat
cagcagacgacgctcccacctgtcgacgaaaacgagcaggtcgacctcgaagagctcgag
cggaaagaccacgtcacgagcccgcctcctcgatacaccgaagcgagcctcgtgaaggcg
ctcgaagagctcggtattggccgtccctcgacctacgcgtcgatcatcgacacaatcgtt
cgtcgcggcttcgttgttcaaaagggcagtgcgctcgtgccgcagtggatcgcgttcgcg
accatgaacctgctcgaagagcacctcggtaagttcgtggaatacgacttcaccgccgag
atggagaacgatctcgaccggatcgcttccggtgaggctgaccgagtcgactggctcaag
ggcttctattacggccgcgaaggcaacgaaggattgcactccgttgtcgacaacctcggc
gagatcgacgcgaaggcgatcaactcgatccctgtcgccgagggcatcatgctccgcgtc
ggccagtacggtccgtatctcgagggtgtcgacgaggctggggagcggaagaccgcgaac
gtacctgaagagctcgcaccagacgaactcaccgagcagctcgcgatcgaattgttcaac
gcaccgccgcaggaggaccgtgtgctcggtcagcaccctgtcacgcacaagaccgtcgtg
gtcaaggacgggcgattcggcccctacgtgaccgagcttgagccggagcctgaagcgtct
actccggaggcagaagacgccaagcccaagaagaaagcggcaaaagcgccaaagccccgg
acgggctcgctgttcaagacaatgacgatcgacgaaatcgatctcgacactgcagtgaag
ctgctcgacctgccgcgggtcgttggtttggatcccgagagtggcgaggagattctcgcg
cggaatggccgcttcggcccgtacataacgaagggggaggagagccgctcgctcgactcc
gaggaccagattttcgcgatcgacctggagggcgcgctcgagcgtcttgcgcagccgaag
tacggggcgcgacgtgcggcctccgccttgaaggaattcgacgcagaccccgtcagcggc
aaaccgatcaaggtgaaggacgggcgcttcggcccgtacgtgacggacggcacaacgaac
gcgacgatccctcgtggcgaggacgtcgaggccgtcaccttcgagcgcgcggtcgaactc
ttgcagatcaaacgtgacaagggcccagccaagaaacctgctgcgaagaagcctgcagcg
aagaagcctgcagcgaagaagcctgcagcgaagaagcccgcagcgaagaagcctgctgcc
aagaaaccggctgcgaagaagtcgacgacttccgagacgacggagtag
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