Helicobacter felis: HFELIS_02180
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Entry
HFELIS_02180 CDS
T01375
Name
(GenBank) DNA helicase II (UvrD)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hfe
Helicobacter felis
Pathway
hfe03420
Nucleotide excision repair
hfe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFELIS_02180
03430 Mismatch repair
HFELIS_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_02180
Enzymes [BR:
hfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFELIS_02180
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFELIS_02180
MMR (mismatch excision repair)
Other MMR factors
HFELIS_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CBY82302
UniProt:
E7AD37
LinkDB
All DBs
Position
186559..188439
Genome browser
AA seq
626 aa
AA seq
DB search
MKKILLADLNEPQREACMHVKGPLLILAGAGSGKTKTLTTRLAYLIASKGVPPQNTLTLT
FTNKAAKEMQERAGQLLRLCGHTHTQSAWLTTFHKFGFAFLKEHASLLEQKKFKLVSPEE
AKTLSRSAILNLKPGFMDADVYLGHAFKMISRIKNHQIDLRNCYPDIQKAYTIYQDILLK
EDRIDLDDLLAIPYALLDRLPDLAIYTSQRYAFIMVDEYQDTNPLQFKLLQKLCTTHQNL
CVVGDDDQSIYAFRGADISNILDFQDQFPQAKVIKLEQNYRSSKEIVKCANTLIAHNTQR
HHKRLFTHKPNHQDQRLVCRHFNDSQEESAFLVRTILERIECGVAHHEIAILYRLNTLSK
GVEESLRRAQIPYRIVGSVGFFGRSIVKDLLAYLHVIHDPCNDEKLLRIINKPPRGLGVN
RVEKITRLSQEKGLCIYQLYVQGLLDSVLDARGRKGLKTLFDHVQKWQSHKGAGVLDTLL
QTFPLDLDCSEDELTCVESLKIMLEDHFEDRQASLADFLEQSILEEPRVKTTNALSCMSV
HAAKGLEFRVVFVVGFEEGFFPYYKADLEEERRLCYVAITRAKEELYLCSVAQRLYFNKL
QQGLKPSSFLEEAKLLIGTNRCAPLF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagattctcttagccgatctcaatgagcctcaaagagaggcttgtatgcatgtc
aagggtcccttgctcattttagccggggcaggcagtggcaagaccaaaactctaaccacc
cgtctagcttacttgatcgctagtaagggtgtgcctccccaaaacacccttaccttaact
tttaccaacaaggccgctaaagaaatgcaagaaagagctgggcaacttttgcgactctgt
gggcatacgcacacgcaatctgcatggctgaccacttttcataaatttggatttgctttt
cttaaggaacacgcctcgctattggaacaaaaaaaatttaaactggtctctcctgaagaa
gccaagacactcagcaggagtgccattcttaatcttaaacccggtttcatggatgcagat
gtgtatttaggccatgcatttaaaatgatctctagaatcaagaatcatcaaattgatcta
agaaattgctatccggatatccaaaaggcctacactatttaccaagacattctattaaaa
gaagatcgaatcgatctagatgatctgttagccatcccttatgccttgctcgatcgtttg
cctgatttggccatctatactagccagcgctacgcctttattatggttgatgaataccaa
gacactaacccactacaatttaaactcttgcaaaaactctgcaccacccatcaaaattta
tgcgtggtgggcgatgacgatcagagcatttatgcttttaggggtgcagacattagcaat
attttagattttcaagatcaattccctcaagccaaagtgatcaaattagagcaaaattac
cgctcctccaaagagattgtcaaatgtgccaacacccttattgcacataatacacagcgt
catcacaaacgcctctttacacacaaacccaaccaccaagatcaacgccttgtctgcagg
cattttaacgattctcaagaggaaagcgcgtttcttgtgcgcacgattttagaacgcatt
gagtgtggagtcgcccaccatgaaattgccattttataccgccttaacaccctttctaaa
ggtgtggaagagagtttgcggcgcgcacaaatcccctatagaatcgtaggcagtgtaggg
ttttttggacgcagtattgtcaaagaccttttggcgtatttgcatgttatccacgatcct
tgtaatgatgagaagttattaagaattatcaataagccccctcgtggcttaggagtcaat
cgggtagaaaaaatcacacggctttctcaagaaaaagggctttgtatttatcagctctat
gtgcaaggcctgctagattctgttttagacgcacgagggcgtaaaggattaaaaacgctc
tttgatcatgtgcaaaagtggcaatcccacaaaggggccggggtgttagacacacttcta
caaacttttccccttgatttagattgcagtgaagacgaacttacctgtgtagagagttta
aaaataatgcttgaagatcactttgaggatcggcaagctagtttagcagattttttagag
caaagtatcttagaagaacccagagtgaagaccacaaatgcgctctcttgcatgagtgtg
catgcggctaaggggttggagtttcgggttgtgttcgtggtgggctttgaagagggcttt
tttccttattacaaggcagatttagaggaagagcgccgtctctgctatgtggcgatcacg
cgcgctaaagaggaactatatttatgcagtgtggctcaaagactctattttaacaagcta
caacagggcttaaaaccctcgtctttcttagaggaggcaaaacttttgatcgggacaaat
cgatgcgctcccttattctaa
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