Helicobacter felis: HFELIS_02590
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Entry
HFELIS_02590 CDS
T01375
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase,DEAD box helicase family protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hfe
Helicobacter felis
Pathway
hfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFELIS_02590 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfe03019
]
HFELIS_02590 (deaD)
03009 Ribosome biogenesis [BR:
hfe03009
]
HFELIS_02590 (deaD)
Enzymes [BR:
hfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HFELIS_02590 (deaD)
Messenger RNA biogenesis [BR:
hfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HFELIS_02590 (deaD)
Ribosome biogenesis [BR:
hfe03009
]
Prokaryotic type
rRNA helicases
HFELIS_02590 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
UvrD-helicase
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CBY82343
UniProt:
E7AD78
LinkDB
All DBs
Position
222831..224240
Genome browser
AA seq
469 aa
AA seq
DB search
MSTQQNIEDLNPQEASAVGFKDLGLHPRILKSIAEAGFVQPSPIQEKAIPVILQGRDVIA
QAQTGTGKTAAFALPIIHNLKNDRSVEALIITPTRELAMQISDEIFRLGKSSRTRTICIY
GGQSIRKQCELLEKRPQVMIATPGRLLDHLKNKRLKHFNPKVVVLDESDEMLDMGFLDDI
EEIFDYLPNDAQILLFSATMPPPIRDLANKILQDPASIHIAPANITNADISQRFYVINEH
ERNEAIMRLLDKENHTKSIIFMRMKREVDELHRFLVERGYKTTPLHGDMEQRARQESIKA
FKSKRADVLVATDVASRGLDISDVSHVFNYHLPLNTESYIHRIGRTGRAGKKGIAITLVT
PLEYKELQRMQKEIDSTIELYEIPDMNEDRLVRSLSKVEVDEEVVSLYERLMEQFEPAQL
TLKLLSLQFKSQKISKEDFLSPPKSDHKTFRKRPTHSKSRHTPRQSRQR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcaacagaatatagaagacttgaatccgcaagaagcctctgctgtgggtttt
aaagatttaggtttgcatcctagaattttaaaatccatcgccgaagccggatttgtccaa
cctagccccattcaagaaaaagcaatccctgtgatcttgcaggggcgcgatgtgatcgct
caagctcaaacgggcacgggtaaaaccgccgcctttgctctgcccattatccataatctt
aaaaacgatcgcagtgtagaagccctcattatcacgcccactagagagctggccatgcaa
attagcgatgagatttttagactgggtaagagctcgcgcacccgcactatttgcatttat
ggagggcagagcatccgcaaacaatgcgaattgttggaaaaacgccctcaagtgatgatc
gctactcccggacggcttttagaccacctcaaaaacaagcgactcaagcattttaaccct
aaagttgtggtgctagatgagagcgatgagatgttggacatgggctttttggacgacatt
gaagagatttttgactacctgcccaatgatgcgcaaattttacttttctctgccacaatg
cccccacccattagagatttggctaataaaatcctacaagaccccgcatctattcacatt
gccccggccaatatcactaacgcggacatttcccagcgcttttatgtgatcaatgaacac
gagcgcaacgaagctatcatgcgtttgctagataaagaaaaccacaccaagagcattatt
tttatgcgcatgaaacgcgaagtcgatgaattgcaccgctttttagtggagagaggttat
aaaacaacgcccttgcatggagatatggagcagcgcgcgcgccaagaatccattaaggcg
tttaaatccaaacgcgccgatgtgttggtcgctactgatgtggctagtcgcgggttagat
attagcgatgtcagccatgtatttaactaccatttacccctcaataccgagagttatatt
caccgcatcgggcgcacaggtagggcaggcaaaaagggcatcgccattactttggtaacc
cccttagagtataaagaattacagcgcatgcaaaaggagatcgactccactatcgagctt
tatgaaattcctgacatgaatgaggatcgcctagtgcgctcgctctctaaagtggaagtg
gatgaagaagtggtgagtttgtatgaacggcttatggagcaatttgagcctgcacaactg
accttaaagcttttaagtttgcaatttaaaagccaaaaaattagcaaagaagattttcta
agccctcctaaatctgaccataagactttccgcaaacgtcccacgcattctaaatcccgc
cacactccacgacagagcagacaaaggtag
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