Helicobacter felis: HFELIS_03910
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Entry
HFELIS_03910 CDS
T01375
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
hfe
Helicobacter felis
Pathway
hfe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HFELIS_03910 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_03910 (uvrA)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HFELIS_03910 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HFELIS_03910 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
AAA_29
AAA_21
nSTAND1
AAA_15
RsgA_GTPase
AAA_25
AAA_16
DnaJ_CXXCXGXG
nSTAND3
APS_kinase
NACHT
AAA_33
Viral_helicase1
AAA_23
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
CBY82475
UniProt:
E7A997
LinkDB
All DBs
Position
complement(361740..364541)
Genome browser
AA seq
933 aa
AA seq
DB search
MDIISIRGAREHNLKNIHLDIPKNKFIVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSY
ARQFLDKVGKPAVDKIEGLIPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARIGRQHC
HLCGAPIASMSATDIIAQVSQDFQYKKVLILAPLVENKKGNFTEIFQTLRQKGVVRAQVD
GVLVRLDEPLELSKNKKHTIKAVMDRLEISDENHARLASALEKALAEGYGQAEVWSLEDQ
QSRHYSEHLACFACKVGFEKLQPLSFSFNSPKGACAECAGLGSKVRLDIQKILDLSLPIS
GMKKIFYHNAYYCALFEGFCEVNGIDPQSHFETLSAHQQEALLYGNGKEIRFMWKQRVIE
QAWRGLVQIAYDMFKDTKDLGQYMSEKACPSCKGHRLKPESLSVKVAGLGIANLLDMPIS
AVHAFFNNPNHFAYLSAQEARIAAPILKEINERVFFLVDVGLGYLTLGRDARTLSGGESQ
RIRIASQIGSGLTGVLYVLDEPSIGLHEKDTAKLIRTLKNLQQKGNTLIVVEHDKETIRQ
ADFIVDIGPKAGKYGGEVVFSGDTATLLQSQHPTALYLQGLKNIARPKHTSKKPTQFLEL
KGVSIHNIKNLQVKIPLGQFVCVTGVSGSGKSSLILQTLLPIAQERLNHAKKNANLGVRV
TGLEHLDKVIYLDQAPIGRTPRSNPATYTGVMDDIREFFAQSKEAKVLGYSASRFSFNVK
GGRCEKCHGEGEIKIEMHFLPDILVQCDSCKGNKYNEQTLAIKIRDKSIADVLHMSVEEA
LEFFSKIPKIATKLQTLVAVGLGYITLGQNATTLSGGEAQRIKLAKELSRKDTGKTLYIL
DEPTTGLHFEDIQLLLNVLHSLVDLGNSMIVIEHNLDIIKNADHIIDMGPEGGDGGGQIV
ATGSPMLLAKHYKRTGSHTGEFLSKELGLEFLA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
ttggacatcattagtattcgtggggctagggagcataatcttaaaaatatccatttggac
atccccaaaaataagttcattgtttttacaggtttgagtggctcaggaaaatctactttg
gcttttgacactctctatgctgagggacagaggcgttatttagaatctctctccagctat
gcgcgccaatttttagataaggtgggcaaacctgcagtggataagattgaaggtttgatc
cccgccatcgccatcgatcaaaaaaccacttccaaaaatccacgctccactgtgggcacg
atcacagaaatctatgattatttgcgtctgctctatgcccgcattggtcgccaacactgc
catttgtgtggcgcgcccatcgcttctatgagcgcaactgacatcatcgcccaagtttca
caggattttcaatataaaaaagtgttgattttagcccccttagtagaaaacaaaaagggg
aattttacagaaatctttcagactctgcgtcaaaagggcgtggtgcgcgcccaagtagat
ggagttttggtgcgcctagatgaacctcttgaactctctaaaaataaaaagcacaccatt
aaggctgtgatggatcgcctagagatcagcgatgaaaaccatgctcgcctagctagcgcg
ctagaaaaagctttagccgaaggttatgggcaggctgaggtgtggagtcttgaagatcag
caaagccgccattacagcgaacatttggcatgttttgcttgcaaagtgggctttgaaaag
ctccaacctttaagcttttcgtttaattcacctaagggagcgtgtgctgaatgcgctgga
ttggggagcaaggtgcgcttagacatccaaaaaatcttagatttgagtttgcccatcagt
ggcatgaaaaaaattttctaccataatgcctactactgcgctctttttgaggggttttgt
gaggttaatggcatcgacccacaaagccattttgaaactctaagcgcacaccaacaagag
gcattgctctatggtaatggcaaggaaatccgctttatgtggaagcagagggttattgag
caggcatggcgtgggcttgttcagatcgcctatgatatgtttaaggacaccaaggattta
ggccagtatatgagcgaaaaagcttgtcctagttgtaaggggcatcgcttaaagccggaa
tctttaagtgtgaaggtcgctggacttggtattgcaaatttgcttgacatgcctattagt
gccgtgcatgctttttttaacaatcctaatcattttgcctatctgagcgcgcaagaagct
agaattgctgctcctattttaaaggaaattaacgaacgcgtattcttcttagtggatgtg
ggattgggatacttaactttaggtagagatgcgcgcacactcagcggaggagaaagccag
cgcatccgtattgctagccaaataggtagtggcttaaccggcgtgctctatgtcttagat
gaacccagtattggcttgcatgagaaagacacggctaaattgatcagaactttaaagaat
ctacaacaaaaggggaacaccctcatcgtagtcgaacatgataaagaaacgattagacag
gcggattttatcgtagatattggacctaaggcaggcaagtatggcggagaagtggttttt
agtggcgacacggcaacacttttgcagagccaacaccccaccgcgctttatttgcaagga
cttaaaaacatcgcgcgccctaagcacacttctaagaagcctacacaatttttagagcta
aagggagtgagtatacataacattaaaaatcttcaagtcaaaattcctttagggcagttt
gtctgtgttacgggagtgagtgggagcgggaaaagctcgcttattttacaaactttgttg
cctatcgctcaagaacgcctaaaccatgccaaaaagaatgctaatttgggggtgcgtgtt
acgggtttagagcatttggacaaagtgatctaccttgatcaagctcctattggcagaacc
ccacgaagcaatccagccacttatacgggtgtgatggatgatattcgggagttttttgcc
caaagcaaggaagctaaggtattaggctatagcgcgagccgctttagttttaatgttaag
ggggggcgttgcgagaaatgccatggggagggagaaattaagattgagatgcattttttg
cccgatattttggtgcagtgcgatagttgtaagggaaacaaatataacgagcaaactttg
gctatcaaaattcgcgataagtccattgccgatgtgctccacatgagtgtagaggaggct
ttagagtttttctctaaaatcccaaaaattgcgacaaagttacaaactctagtggctgta
ggcttgggttatatcactttggggcaaaacgccaccactctaagcggtggggaagcccaa
cgcataaaactcgctaaggaattaagccgtaaagacacaggcaaaacgctttatatctta
gatgaacccactacggggctacattttgaagacatccaattacttttgaatgttttgcat
tctttggtggatttaggcaattctatgattgttatcgaacataatttggatatcattaaa
aacgctgatcacattattgacatggggcctgaggggggggatggtggggggcagattgtc
gccacaggttcacctatgctattagccaaacactataaacgcacaggaagccacacaggg
gaatttttaagtaaagaattagggttggagtttctcgcttaa
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