Helicobacter felis: HFELIS_04680
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Entry
HFELIS_04680 CDS
T01375
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hfe
Helicobacter felis
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfe03032
]
HFELIS_04680 (topA)
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_04680 (topA)
Enzymes [BR:
hfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HFELIS_04680 (topA)
DNA replication proteins [BR:
hfe03032
]
Prokaryotic type
DNA Topoisomerases
HFELIS_04680 (topA)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HFELIS_04680 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CBY82552
UniProt:
E7A9M6
LinkDB
All DBs
Position
complement(437732..440014)
Genome browser
AA seq
760 aa
AA seq
DB search
MGKNTKLIIVESPTKAKTIAHFLDNSYEVIASKGHVRDLSKYAMGIKVQDNKFIPKYAID
KDHEEIVAQILQKAKNAQEIYIATDEDREGEAIGYHIAYLIDQAGNRSKDPLIEMRALEE
QSQTKNPHPIFAFPRIVFHEITKTAILHALKHPKTLDVHKINAQLARRLLDRIVGFSLSS
LLASKISKGMSAGRVQSAALKLVVDREREIKVFKPIIYYEITGTIAQASVSLQSYRHEKI
KKQGLRDSKEALEMVANLSAQTYQVQEISTKEKNTPSPPPFMTSTLQQSASNQLGYSPSK
TMSIAQKLYEGVMTSEGVSGVITYMRTDSLNIAKEAIESARVFIEQTYGAPYVPKKPKVY
TSKNKSAQEAHEAIRPTNLAFTPAIAKDYLKPEEHKVYTLIYQRFLASQMSDARLESQSV
SFACESLGAVFKASGHKLLFEGFYKVLGNGDKDTLLPSFTLHQEVRLEKLEAKECSTQPP
ARYSEASLIKTLESLGIGRPSTYAPTIALLLSRDYVSLQQKQLTPTPNAFSVIEILEKHF
SEIVNATFSAGLEDKLDAIASHELNWQDMLLKFYTPFMAQIEEGKIQIASQKVSAPTGES
CPKCGAPLVQRTGRYGVFVACSAYPKCKFIKSEVVQTEDLGVCEKCGAPMVSKRGRFGTF
VACSAYPTCKNIRNEESKNTPALAKCPQCGGDVRAKRGKRGMFYGCDNYPSCKFISNYKP
APKPCPECGGLCVMKIYKTKPSVQECLQCHIQVEIEGEQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaacaccaaactcatcattgtggaatcccccactaaggctaagaccatcgcg
cattttttagataatagctatgaagtgattgcctctaaaggtcatgtgcgtgatttgagc
aagtatgctatgggaattaaagtgcaagataataaatttattcctaaatacgccatagat
aaagatcatgaagaaattgtggcgcaaattttgcaaaaagctaagaacgcacaagaaatt
tatattgctacagatgaggatcgcgagggcgaagctattggttaccacatcgcttatctc
attgatcaagcaggcaatagaagcaaagaccctttaatagaaatgcgcgccttagaggaa
cagagtcaaaccaaaaacccccatcctatttttgcttttcctcgcattgttttccatgag
attaccaaaactgctatcttgcacgcactcaaacaccctaaaacccttgatgtgcacaag
atcaacgcccaattagcccgtagacttctggatcgcattgtgggttttagcttaagctct
ctattggcttctaaaatctctaagggcatgagcgcgggacgcgtgcagagcgcagcgctt
aaattagtggtggatcgcgaaagagaaatcaaagtctttaaacccattatctactatgag
attacaggcacgatcgcgcaggcgagcgtgagtttacaaagttaccgccatgaaaagatc
aaaaaacaagggcttagggattctaaggaagctttagagatggttgctaatttaagcgcg
caaacctaccaagtccaagagatcagcaccaaagagaaaaataccccttctcctcctcct
tttatgacctcaactttgcaacaaagcgcttctaatcagttgggttatagcccttctaaa
acgatgagcattgcccaaaaactctatgaaggtgtgatgacttcagagggggtgagtggg
gtgatcacctacatgcgcacagacagccttaacattgccaaagaagccatagaatctgcg
cgtgtctttattgaacagacttatggcgcgccctatgtgcccaaaaaacctaaggtttat
acttccaaaaacaagagcgctcaagaagcccatgaggcgatccgccccactaatctggcc
ttcacacctgcgattgcaaaagactatctcaagcccgaagagcataaggtctatacatta
atttatcaacgctttttggcttctcaaatgagcgatgcgcgccttgagagtcagagtgtg
tcctttgcctgcgagtctttaggggcagtgtttaaggctagtggacataaattgcttttt
gaaggattctataaagttttgggcaatggagataaggacacactcttgccctcttttaca
ctccatcaagaagtgcgcttagagaaattagaggctaaagagtgcagcacacaacccccc
gcgcgttattcagaggcctctttgatcaagaccttagagagtctaggaattggaaggcct
agcacttatgcgcccactattgccctactgcttagccgagactatgtatctttgcagcaa
aaacagctcacacccactcctaacgcttttagcgtgatagagattttagaaaagcacttt
agtgagattgtgaacgccacctttagcgcaggattggaggataagctcgatgcgatcgct
agccacgagctcaactggcaagacatgcttttaaaattctacaccccctttatggcacaa
attgaagagggcaagattcaaattgcttctcaaaaagtgagcgcgcccacgggcgaatcg
tgtcctaaatgtggcgcgcctttggtgcaacgcacgggtagatacggcgtttttgtggct
tgtagcgcttaccctaaatgcaagtttataaaatctgaagttgttcaaacagaagattta
ggcgtatgtgagaaatgcggtgcgccgatggtgagcaaaagagggcgttttggaacgttt
gtggcttgtagtgcttaccccacttgcaagaacatccgcaatgaagagagcaaaaacacc
cccgcccttgccaaatgcccacaatgtggaggagatgtgcgcgccaaaagaggtaagaga
ggaatgttttatggttgcgacaattaccctagctgtaaattcatctctaattataaacct
gctccaaaaccatgtcctgagtgtgggggcttatgtgtgatgaaaatctacaaaacaaag
ccaagtgtgcaagaatgtttgcaatgccatatccaagtagaaatagagggtgagcaggtg
tga
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