Helicobacter felis: HFELIS_06890
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Entry
HFELIS_06890 CDS
T01375
Name
(GenBank) DNA polymerase III subunit gamma
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hfe
Helicobacter felis
Pathway
hfe03030
DNA replication
hfe03430
Mismatch repair
hfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFELIS_06890
03430 Mismatch repair
HFELIS_06890
03440 Homologous recombination
HFELIS_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfe03032
]
HFELIS_06890
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_06890
Enzymes [BR:
hfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFELIS_06890
DNA replication proteins [BR:
hfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFELIS_06890
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFELIS_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_14
AAA_5
AAA_16
ResIII
TIP49
AAA_30
DEAD
DNA_pol3_gamma3
AAA_19
TsaE
DUF815
Mg_chelatase
NanE
Motif
Other DBs
NCBI-ProteinID:
CBY82773
UniProt:
E7AAV2
LinkDB
All DBs
Position
671821..673290
Genome browser
AA seq
489 aa
AA seq
DB search
MVLALKYRPKHFQDLVGQESVSKTLSLALEQGRLAHAYLFSGLRGSGKTSSARIFARALQ
CEKAPTSTPCDVCANCVDALQNKHVDIIEMDGASNRRIEDIREVIEQTKYQPSMGAFKIF
IIDEVHMLTKEAFNALLKTLEEPPPRVKFILATTDPLKLPATILSRTQHFHFKKIPPKAI
VAHLQHILSLEGVQYQEGVLEILARSGGGSLRDTLTLTEQAINYSAGPLTLEMITRMLGL
VDMQVLHDFFQALRDNPERICDSLRLFEEYDPQVVLDEMSLFLKEALLHKTFPLNLVDAW
MGVLAQAKSLLHAGVDGGFVLTLSALKMQATPTPQAPSLSQRPAPIPTQTPTPPPAPPKQ
PTPQELFEKLIVRIHAHNPDLGNLFKKFVQFHAFENKTLWWVSRADAHAKGILMQHFELI
KQLVAEVFGEGVQAQALKVTSPSEPPPPPSATPPPTAPNLREQFMQENSNLVGAMQEHLG
IVDVKVEKS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtggttctagctcttaaatatcgccctaaacattttcaggatttggtaggacaagaaagc
gtgtctaaaaccctaagtttggctttagagcaggggcgtttagcgcatgcctatttgttt
agtgggcttaggggttcgggcaagacttctagcgcgcgcatttttgcccgcgccttgcag
tgtgaaaaagcccccaccagcactccctgcgatgtctgcgctaattgtgttgatgcgcta
caaaataagcatgtagacattatcgaaatggatggcgcgtctaaccgccgtattgaagac
atacgagaagtgattgagcagaccaagtaccaacctagcatgggagcttttaagattttt
attatcgatgaagtgcacatgctcactaaggaagcctttaatgctttgctaaaaacgctt
gaagaacctcctcctcgtgtcaaattcattttggccactacagatcctctcaaactcccc
gccaccattcttagccgcacccagcattttcattttaaaaaaatcccccctaaagccatt
gtggcgcatttgcaacacatcttaagtttggagggcgtgcaataccaagagggggtctta
gagatattagctagaagtgggggagggagcttgcgagacactttaactctcactgagcag
gccattaattacagtgcaggtcccctcactcttgagatgattacacggatgttaggtcta
gtggacatgcaagttttgcatgatttttttcaagctcttagggataatccggagcgcatc
tgtgactctttgagactttttgaagaatacgacccgcaagtggtgcttgatgagatgtct
ctttttcttaaagaagctctgctccataaaacttttccactgaatttagtggatgcgtgg
atgggtgttttggcccaagccaagtctcttttgcatgcgggcgtggatgggggttttgtc
ttaactctgagcgcgctcaaaatgcaagcaacgcccacacctcaagcgccatcactctct
caacgcccagcaccaatacccactcaaactccaacaccacctccagcaccacccaaacaa
cccacccctcaagaactttttgagaagcttattgtaaggattcatgctcataatcccgat
ttgggcaacctctttaaaaaatttgtccaattccatgcttttgaaaataaaactctttgg
tgggtttcaagagcggatgcccatgctaaaggaattttgatgcaacattttgagttgatc
aaacaacttgtagcagaggtctttggtgagggcgtgcaggctcaagccctaaaggttact
tctccctcagagcctcccccccctccttctgcaactcctccccccacagctccgaattta
cgcgagcaattcatgcaagaaaactccaatttagtaggggcgatgcaagagcatttaggg
attgttgatgtcaaggtggaaaaatcttga
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