Helicobacter felis: HFELIS_08100
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Entry
HFELIS_08100 CDS
T01375
Symbol
hupB
Name
(GenBank) DNA-binding protein HU homolog
KO
K03530
DNA-binding protein HU-beta
Organism
hfe
Helicobacter felis
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfe03032
]
HFELIS_08100 (hupB)
03036 Chromosome and associated proteins [BR:
hfe03036
]
HFELIS_08100 (hupB)
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_08100 (hupB)
DNA replication proteins [BR:
hfe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HFELIS_08100 (hupB)
Chromosome and associated proteins [BR:
hfe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HFELIS_08100 (hupB)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HFELIS_08100 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CBY82894
UniProt:
E7ABS1
LinkDB
All DBs
Position
complement(791431..791736)
Genome browser
AA seq
101 aa
AA seq
DB search
MKKLEFIDLMQKEGGFKDKKDTELAFNSFIKAIEKALSQHESVELVGFGKFEAVLQKGKK
GKVPGSDKTYTTKDKMVPKFKPGKILKDAVATPPKIGKKKK
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattggagtttatagatttaatgcaaaaagagggagggtttaaggataagaag
gacactgaattagcgttcaatagttttattaaagctattgaaaaagcgttgagtcaacat
gagagcgtagagttggtaggttttggcaaatttgaagctgttttgcagaaaggcaaaaaa
ggcaaggtacccggtagcgacaagacctatactaccaaagataaaatggtgcctaagttt
aaacccggaaaaatccttaaagatgcagtagccacccctccaaaaattggaaaaaagaaa
aaatag
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