Helicobacter felis: HFELIS_08860
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Entry
HFELIS_08860 CDS
T01375
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hfe
Helicobacter felis
Pathway
hfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HFELIS_08860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfe03019
]
HFELIS_08860
Enzymes [BR:
hfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HFELIS_08860
Messenger RNA biogenesis [BR:
hfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HFELIS_08860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
CBY82970
UniProt:
E7AC01
LinkDB
All DBs
Position
complement(870840..872069)
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AA seq
409 aa
AA seq
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MADWDTSFLRLKRALPSSLLTLHAMIEQGGYQACIVGGSVRDLLLGKEPKDYDLASSATP
DQLKALLEGMEGIKIIELGRAFGTLGVGFEGWLFEITTFRQEGEYRDHRHPSALKFVKSI
ESDLARRDFTINALALHPQKGLLDLYSGLEDLKKGVLRLVGDPTLRLQEDALRILRALRF
SSVLGFSLEEVTQKALWEQAPLLEHIAKERICMEFFKLLLGDFVRSCAPFQSLLEKTLKA
RLKPLEGLENTPLNLRARLLYLAQSWDTQTLRDFCTRLKFSKKLTQSLHKLHAHFPLEPQ
EPSRLWIKTQLQSLYLGELRALLGFYQTQDPVLSARLKSELKDILHKREAYALRHLAIKG
TDLLELGFQGTQVGALLKACLEGVMCGAVCNEREALLQYAKECPALREN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggccgattgggacacctcttttttgcgcttaaagcgcgctctgccctccagtctgcta
actttgcacgctatgatcgagcaggggggttatcaagcatgtatcgtggggggaagtgta
cgcgatctgctcttgggtaaagagcccaaagattacgatctggcctctagcgcaactcca
gaccagttaaaagctctcctagagggcatggaggggataaaaattatagagctagggcgt
gcctttggcactttaggggtgggctttgaggggtggctttttgagatcaccacttttagg
caggagggagaatatagagatcaccgccaccctagcgcattaaaatttgtaaagtccata
gaaagcgatttagcacggcgtgatttcaccatcaacgccctagccctccaccctcaaaaa
ggacttttagatttatatagtgggctggaagatttaaaaaaaggggttttaaggttggtg
ggcgatccgactttgcgcctgcaagaggacgctttgcggattttacgcgccctgcgtttt
tctagcgtgctaggttttagtttggaagaggttactcaaaaagccctatgggaacaagcc
cccttactagaacacatcgccaaagaacgcatctgcatggagttttttaaactcttgctg
ggggattttgtgcgctcttgtgcgccttttcaatctctcttagaaaagactttaaaagcg
cgcttaaagcccttagagggattagaaaacacccctttgaatttgcgcgcgcgcttgctc
tatttagcccaatcttgggacacccaaaccctgcgtgatttttgcacgcgtttaaaattt
tctaaaaaactcacccaatccttacacaaactgcatgcccacttccccctagagccccaa
gaaccctcccgcctttggatcaaaacacaattacaaagtttgtatttaggcgaactgcgc
gctttgctaggcttttatcaaacccaagaccccgttttaagcgcgcgtttaaaaagtgaa
cttaaagatattttgcacaaacgcgaagcttatgcgttgcgccatttggcgatcaagggc
acagacttgttagaacttggttttcaaggcacgcaagtgggcgcgcttttaaaggcgtgt
ttagagggggtgatgtgcggggctgtgtgcaatgagagagaagcgttattacaatatgcc
aaagaatgccccgcgttaagagaaaattag
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