Helicobacter felis: HFELIS_09830
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Entry
HFELIS_09830 CDS
T01375
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hfe
Helicobacter felis
Pathway
hfe03030
DNA replication
hfe03430
Mismatch repair
hfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HFELIS_09830 (dnaE)
03430 Mismatch repair
HFELIS_09830 (dnaE)
03440 Homologous recombination
HFELIS_09830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hfe03032
]
HFELIS_09830 (dnaE)
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_09830 (dnaE)
Enzymes [BR:
hfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HFELIS_09830 (dnaE)
DNA replication proteins [BR:
hfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HFELIS_09830 (dnaE)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HFELIS_09830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBY83067
UniProt:
E7ACN6
LinkDB
All DBs
Position
971417..974989
Genome browser
AA seq
1190 aa
AA seq
DB search
MENFTHLHLHTEYSLLDGANKIKILAQRIKELGMTSVSMSDHGNMFGAIDFYTCMKKEGI
KPIIGIETYLHNAENLEDKQSRQRFHLCLYAKDQEGYANLMYLSSQAFLKGFYYFPRINK
KLLKERAKGLICSSACLQGEINWHLNLNNPKNKQYGAKGYEEAKRIACEYQDIFGDDFYM
EIMRHGITDQLYIDEQLIKLSLQTGIKLIATNDTHYTKQEDARAQEVAMCVAMNKTFGDK
DRLKHSVHEFYIKSPAQMAELFADIPEALEHTQEIARKCQLELDLKDDSNPPTPPRFKFT
KEYATKEGLDFEEDALYFAHKAREGLKKRLEIIDPSQHATYQERLEYEIKTIVEMKFAGY
MLIVWDFIRHARESGIPVGPGRGSAAGSLVAFCLQITDIDPLKYDLLFERFLNPERVSMP
DIDTDFCQRRRGEMLDYMVSKYGKYNVAQVITFNKMLAKGVIRDVARVLDMPYKEADEMA
KLIPNRLGITLKEAFELEPKIAMLINTNKTAKQVWEFALNLENLNRSAGKHAAALVVDSE
RELWHKTPLYTSERTGGIVTQYSMKYLEAVDLIKFDFLGLKTLSVIDDALKLIEKYAHQK
IDFLSVDMDDPSVYQTIQEGNTIGIFQIESGMFQTLNKRLRPSCFEDIIAIIALGRPGPM
ESGMVDDFVNRKHGLEPITYAFDALEPILRPTYGTIVYQEQVMQIVQTIGGFSLGEADLI
RRAMGKKDAQIMADNRAKFIEGARKRGYEADKAGDLFDLIVKFAGYGFNKSHSAAYAMLT
FQTAYLKTHYKHEFMAAMISSECRHIEEVAHYVDEASSMGIEVQRPHVNVSDVRFRVQEE
GGKKHIVFGLEAIKGAGEGPLGTLVEIREKHGAFKDLQDFISKIDFSKFSKRILEPLIKS
GSLDNLGYNRRTMLENLDAICEEGRRKDKTNAQMRAGLFADAQTERAHLELTPYEEYDIN
TLLDFEYECMGIYFSGHPLNEFKDQIKPLKNILKSTDIKRVEIGSNVVLVGKILELKRKL
GKKSKKPYGEAVIVDLSGRFELMLFEKQLNALEHLDTNLPLAFKCKVEEQEEVARLRLLE
IKTLEQISTEKIAKVRYKAEAQPSDIEPLDLQADFNKATSCLQGQPLCLVVDTSVPAELF
AHLKEVANAHKGERALCVVFKEKDKKITISTPLKVSAQIKESFKNYEWVD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacttcacccatttacacttacacaccgaatactcccttttggatggggcaaat
aaaattaaaatcttagcccagcgcattaaagagttgggcatgactagtgtgagcatgagc
gatcatggaaacatgtttggggcgatcgacttttacacctgtatgaaaaaagagggaatc
aagcccattattgggattgaaacctatttgcataacgccgaaaacttagaggacaaacaa
tcccgccaacgcttccatttatgcctctatgccaaagatcaagagggctatgccaacttg
atgtatctaagctcacaggcgtttctcaagggcttttactattttcctcgtatcaataaa
aaactgctcaaagaacgcgctaagggtttgatctgctcgagcgcgtgtttgcaaggggaa
attaattggcatctcaacctcaacaaccccaaaaataaacaatacggcgcaaagggctat
gaagaggccaaacgcatcgcctgcgaataccaagacatctttggagacgacttctatatg
gaaatcatgcgtcatggcattaccgatcaactctacattgacgagcaactcatcaaactc
tctttgcaaaccggtattaaactcatcgccaccaatgacacccactacaccaaacaagaa
gacgcgcgcgcccaagaggttgctatgtgcgtggcgatgaataaaacttttggggataag
gaccgcttaaaacactccgtgcatgagttttatatcaaatcccccgcacagatggcagag
ttgtttgccgacatccccgaagccctagagcacacccaagagatcgcgcgcaaatgccaa
ctagaactagacctaaaagatgactccaacccccccacccctccgcgctttaaattcacc
aaagaatacgccaccaaggaggggttagactttgaagaagacgcgctctactttgcccac
aaagctagagagggcttgaaaaaacgcctagagatcatcgatcctagccaacacgccact
taccaagagcgcctagaatacgagattaaaactatcgtggagatgaaatttgccggctat
atgctcatcgtatgggattttatccgccatgctagagagagtggaatcccggtgggtccg
gggcgcgggtctgcggcggggagcttggttgctttttgtttgcaaattactgacattgat
ccgctcaaatacgatctgctatttgagcgctttttgaaccccgagcgcgtgagcatgccc
gatattgatacggatttttgccaaagacggcggggcgaaatgcttgattacatggtttcc
aaatatggaaaatacaatgtcgcccaagtgatcacctttaacaagatgttagctaaaggg
gtgattcgcgatgtggcgcgcgtgctggatatgccctataaagaagccgatgagatggct
aaactcattcctaatcgtctaggaatcacccttaaagaagcctttgaattagaacccaag
atcgcaatgctcatcaataccaacaaaaccgccaaacaggtttgggaatttgccctaaac
ctagagaatctgaaccgctcagcgggcaagcatgcggctgcattggtggtggatagtgag
cgcgaattgtggcataagaccccgttatatactagcgagcgcacgggaggcattgttacc
cagtattcgatgaaatacctagaagcggtggatttaattaagtttgacttcttggggctc
aaaactctaagcgtgatcgatgacgcgctcaagctcattgaaaaatacgcgcaccaaaag
atcgattttttgagtgtggatatggacgatccttccgtttatcaaaccattcaagagggt
aacaccattgggatattccaaattgaatcgggcatgtttcagaccttgaataaacgcctg
cgcccctcttgttttgaggacatcatcgccattatcgccttagggcgacccgggcctatg
gagtcggggatggtggatgattttgtcaatcgcaaacacggactagaacctatcacttat
gcctttgacgcgttagaacccattttacgccccacttatggaacaattgtctatcaagag
caggtgatgcagatcgtgcagaccatcgggggcttttctttgggtgaggcggatttgatc
cgccgtgcgatgggaaaaaaagacgcgcaaattatggcggataatcgcgccaaattcatt
gagggggcgcgcaaaagaggctatgaggcagacaaagcgggcgatctctttgatttgatc
gtcaaatttgccggctatggctttaacaaatcccactcagcagcctatgccatgctcacc
ttccaaaccgcctacctcaaaacccactacaagcacgaatttatggctgcgatgattagc
agtgaatgccgccacattgaggaggttgcccactatgtggatgaggcgagctcaatgggt
attgaagtgcaacgcccccatgtcaatgtgtccgatgtgcgctttagggtgcaagaagag
gggggaaaaaagcatattgtctttggtttggaggcaatcaagggggcgggcgaagggcct
ttgggcactctggtagaaatccgcgagaaacatggtgcatttaaagatttgcaagatttt
attagcaaaatcgacttttctaagtttagcaagcgcattttagaacccttgatcaaatct
gggagtttagacaacttgggctacaatcggcgcactatgttagagaacttggatgccatt
tgtgaagaggggcgcagaaaggataaaaccaacgcccaaatgcgcgccggactctttgca
gacgcgcagactgaacgcgcgcatttggagctaaccccctatgaagaatacgacatcaat
actttgctagattttgaatacgaatgcatgggcatttacttttcagggcacccgctcaac
gagtttaaagatcaaatcaagcccttaaaaaatatccttaagagcacggacattaagcgc
gtggaaattgggagtaatgtcgtgttagtgggcaagattttagaactcaagcgcaagcta
ggcaagaaaagcaaaaaaccttacggcgaggcggtgatcgtggatttgtctgggcgcttt
gagctcatgctttttgaaaaacaactcaacgccttagagcatttagacaccaatctgccc
ctagcctttaaatgcaaggtggaggagcaagaggaggtcgcgcgcttgcgcctcttagag
atcaaaaccctagagcaaatcagcacagagaaaatcgccaaagtgcgctacaaagcagaa
gcccagcctagcgacatcgaacctttggatttgcaagctgactttaacaaagccacttcg
tgcttgcaggggcagcccttgtgcttggtggtggatactagcgtgcctgcggagttgttc
gcgcatttaaaagaagtcgccaatgcccacaagggcgagcgtgccctctgtgtggtgttt
aaagagaaagacaagaaaatcaccatcagcacccccctaaaagtgagcgcgcagatcaaa
gagagttttaaaaattacgagtgggtggattga
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