Helicobacter felis: HFELIS_12990
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Entry
HFELIS_12990 CDS
T01375
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hfe
Helicobacter felis
Pathway
hfe00260
Glycine, serine and threonine metabolism
hfe00460
Cyanoamino acid metabolism
hfe00630
Glyoxylate and dicarboxylate metabolism
hfe00670
One carbon pool by folate
hfe00680
Methane metabolism
hfe01100
Metabolic pathways
hfe01110
Biosynthesis of secondary metabolites
hfe01120
Microbial metabolism in diverse environments
hfe01200
Carbon metabolism
hfe01230
Biosynthesis of amino acids
hfe01240
Biosynthesis of cofactors
hfe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HFELIS_12990 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HFELIS_12990 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HFELIS_12990 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HFELIS_12990 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HFELIS_12990 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HFELIS_12990 (glyA)
Enzymes [BR:
hfe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HFELIS_12990 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
DUF5768
Motif
Other DBs
NCBI-ProteinID:
CBY83383
UniProt:
E7A9R3
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All DBs
Position
complement(1286808..1288052)
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AA seq
414 aa
AA seq
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MSKVFHLEQSDPEIFNLIEAELTRQSEHLEMIASENYTFESVMEAMGSVLTNKYAEGYPF
KRYYGGCEVVDQVEKLAIERAKTLFNCQFANVQPHSGSQANMAIYHALLKPHDKILSMEL
SSGGHLTHASKVSVTGQHFQGFHYGVNQEGWIDYEEVLKIAQIVRPKLLVCGFSAYPREI
DFKRFREIADSVGALLMGDVAHIAGLVVAGEHPHPFPHCHVVSSTTHKTLRGPRGGLILS
NDEELAKKIDKALFPGTQGGPLMHVIAAKAVGFLENLKPTWKTYAQQVKANTQVLVEGLL
KHGFDLVSGGSDNHLLLMRFKDFSGKEAEEALGRVGIIVNKNTVPQETRSPFITSGIRLG
SPALTSRGMSTTEFAFIADKIAEVLHNLNADHSSIKEEIKALTQGFQVYNQAIF
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagttttccatttggaacagagcgatccagaaatttttaatctaattgaggct
gagttaacgcgccaaagcgagcatttggagatgatcgctagtgaaaattatacttttgag
agtgtgatggaagcgatggggagcgtgcttaccaataagtatgcagaggggtatcctttt
aagcgttattatgggggctgtgaagtagtagatcaggtggaaaaattagccattgagcgg
gctaagacattatttaattgccaatttgccaatgtgcaaccccattcgggcagtcaagcc
aatatggcaatctaccacgctttgctaaaaccccatgacaagattttgagtatggagctt
agcagtggtgggcatttaacccacgcctctaaggtgagtgttaccggacagcattttcag
ggttttcactatggagtgaaccaagaaggctggatcgattatgaagaggtgcttaaaatt
gcccaaatcgtgcgccctaaattattagtttgtgggttctcagcctaccctagagaaatc
gatttcaagcgctttagagaaattgccgactctgtgggcgcgttgttgatgggcgatgtg
gctcacattgccgggctggtggtggcaggcgaacacccccaccccttccctcactgccat
gtagtcagtagcaccacacataaaactctcagaggtcctagagggggcttgattcttagc
aatgatgaggaattggccaagaagatcgacaaagccctttttccgggcactcaagggggg
cctttgatgcatgtgattgcagctaaggcagtgggattcttagagaacttaaaacctact
tggaagacctacgcccaacaggttaaagccaacacgcaagttttggttgaggggctttta
aaacatgggtttgacttagtcagtggcgggagtgataaccatttattactcatgcgtttt
aaagattttagcggaaaagaggctgaagaggctttgggaagggttggtatcattgtgaat
aaaaacactgtgccacaagaaacaagaagcccttttatcacgagcggcattcgcttagga
tcacccgcactcacaagtcgaggcatgagcacaacagagtttgcttttattgcagataag
attgccgaagttttgcacaatctcaacgcagatcacagctccattaaagaggaaattaag
gccttgacacaagggtttcaggtctataatcaagcaattttttaa
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