Helicobacter felis: HFELIS_13060
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Entry
HFELIS_13060 CDS
T01375
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hfe
Helicobacter felis
Pathway
hfe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HFELIS_13060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfe03021
]
HFELIS_13060 (rpoA)
03400 DNA repair and recombination proteins [BR:
hfe03400
]
HFELIS_13060 (rpoA)
Enzymes [BR:
hfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HFELIS_13060 (rpoA)
Transcription machinery [BR:
hfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HFELIS_13060 (rpoA)
DNA repair and recombination proteins [BR:
hfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HFELIS_13060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
CBY83390
UniProt:
E7A9S0
LinkDB
All DBs
Position
complement(1293863..1294873)
Genome browser
AA seq
336 aa
AA seq
DB search
MKVIKVAPQAPMDISVEKISDRHIKVCVSAFEAGYAITLAHPLRRFLLLSSVGYAPIGIK
VEGVNHEFDSLRGISEDMALFIANLKNIRLVGKHLDSAQNDQVVVHYTFKGPAKLSGKDL
ENEEISVVNHDAYLATINEDAHLEFSLIVQKGMGYVPSESIRGYISSDYIPLDAYFTPIK
KVVYNIENMLVDGNPNFEKLIFEIESDGQVDPQRAFQEAIRTMNAQMHIFNTNIADYKGN
AHLEEGLERDLLMEIEGLNLSARCFNCLDKIGLKYVGELVLMDAYELKNIKNLGKKSYDE
IAEKLEGLGYPVGSEISAEFRASLETKLDKIKNQES
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgattaaagtagctccacaagcacctatggatatcagtgtggagaagattagc
gatagacacatcaaagtgtgtgtctctgcctttgaagcgggttatgctatcacactagcc
caccctctaagacgattcttgctcttaagttctgtaggctatgcacccattgggatcaaa
gttgaaggggttaaccacgagtttgactcgttgcgcgggatttctgaggatatggctttg
tttatcgccaatttgaagaatatccgcttggttggcaagcatttagacagcgcccagaac
gatcaagtggtggtgcattatactttcaaaggcccagccaaattaagcggtaaagattta
gaaaacgaagaaattagcgtggtcaaccatgatgcctatctagccacaatcaatgaagat
gcgcatttagagttttctcttattgtgcaaaagggcatgggatatgtgccttccgagagc
attcgaggctacatttctagcgattatatccccctagatgcctattttacacctattaaa
aaagtggtttataacattgaaaacatgctcgtggatggcaatcccaatttcgagaaactc
atttttgagattgagagcgatgggcaagtagaccctcaacgcgccttccaagaggcaatt
agaaccatgaacgcccaaatgcacatctttaacacaaatattgccgattacaaaggcaat
gcccatttagaagagggcttggagagagacctcttgatggaaattgaggggctgaatttg
agcgcgagatgctttaattgcttggataaaatcgggcttaagtatgtgggcgagttagtg
cttatggacgcttacgagctcaaaaatattaaaaatcttggcaagaagtcttatgatgaa
attgctgaaaaattagagggattgggttatcctgtaggttctgaaatttcagcagagttc
agggcatctttagagaccaagttagataaaatcaaaaatcaggagagttaa
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