Helicobacter felistomachi: NHP21005_04360
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Entry
NHP21005_04360 CDS
T10843
Symbol
rny
Name
(GenBank) Ribonuclease Y Rny
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hfi Helicobacter felistomachi
Pathway
hfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NHP21005_04360 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hfi03019
]
NHP21005_04360 (rny)
Messenger RNA biogenesis [BR:
hfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NHP21005_04360 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
TMEM120A-B
Motif
Other DBs
NCBI-ProteinID:
BEG56748
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Position
384829..386394
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AA seq
521 aa
AA seq
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MEEALSILIPCLFTGIGVFYFTKKNYSAASQNLIARAKAQADMLIYQAQVLYKSKEEESK
TLALQLQQEHDERQKTQESAYQHKLDELKNREKQQQQHWHHKHKQLEQHKSELDTLRREL
EQGKYAQDKLCQEYQELKEQAMQTLMECSGYTKEEAQTLLLRLLEEELILQKAALVRRYE
RQAKKEAKERAHFILAEATSRFASSFAMENLTSVVSLPNAEFIGRIIGKEGKNIDTFKRI
SGVELMIDEETKTITLSCFNLYRRQIATQTLELLIQDGRIQPSRIETVYQRVEANMEESI
LKEAEEVILDLQLDSMDEELKRLLGRMKYRTSYGQNALTHSIEVAILAGMIAEQLGGDSK
LARRAGILHDIGKALTQEHGGDHVDLGAEVCVRCHEHPVVINAIYAHHDRQEIKSVECAA
VCAADALSAARPGARRKENENFLVRMHDLERIASQQSGVEKVFAMDAGREVRVIVRPEQV
SDAKVPLLARDIAKDIQANLQYPGEVVVHVIRENHAKAIAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctttaagcattttaattccctgcttattcaccggtatcggcgtgttttac
ttcaccaagaaaaattacagcgccgctagccaaaatctcatcgcccgagccaaagcccaa
gcggacatgctcatctaccaagcccaagtgctttacaagagcaaagaagaagagtctaaa
accctagctttgcaactgcagcaagaacacgatgagcgtcaaaagactcaagaatccgcc
taccaacacaagctagatgaacttaaaaatagagaaaaacaacaacaacagcattggcac
cacaaacataaacaactagaacagcataaaagcgagttagacacactaagacgtgaacta
gagcagggcaagtacgcccaagataagctttgccaagagtaccaagagctcaaggaacaa
gccatgcaaaccctcatggagtgctcgggctacaccaaagaggaagcccaaaccctgctc
ttgcgcctgcttgaagaagaattgattttacaaaaggcggctttggtgcgccgctatgag
cgccaagccaagaaggaagccaaagagcgcgcacatttcatcttagccgaggcgacttca
cgctttgcaagctcttttgccatggagaatttaaccagcgtggtttctttacccaatgcc
gagtttatcgggcgcatcatcggcaaagagggcaagaacatcgacacctttaagcgcatc
agcggggtggagttgatgatcgatgaggaaaccaagaccatcactttgagttgctttaat
ctctaccggcggcaaatcgccacacaaactttggagttgttgattcaagatgggcgcatc
caaccttcgcgcattgaaaccgtgtaccaacgggtggaagcgaacatggaagagagcatt
ttaaaagaagccgaagaagtcattttagacctgcaattagattccatggacgaggaatta
aaacggctcttggggcgcatgaaataccgcaccagctacgggcaaaatgcgctcacccac
tccatagaggtggcgattttagccggcatgatcgccgagcaactgggcggcgattctaaa
ctagcccgccgggcggggattttgcacgacatcggcaaggctctcacacaagaacatggg
ggcgatcacgtagatctgggggctgaggtgtgtgtgcgctgccacgagcaccctgtggtg
atcaatgctatttacgcccaccatgaccgccaagagatcaagagtgtagagtgcgctgcc
gtgtgcgccgctgatgccttgtctgctgcaagacccggggcacgccgcaaggaaaacgaa
aacttcctagtccgcatgcacgatttggagcgcatcgccagccaacaaagcggggtggaa
aaagtctttgccatggatgcggggcgagaggtgcgcgtgattgtccgccctgagcaagtg
agcgatgccaaagtccccctgcttgcccgcgacatcgccaaagacatccaagccaatcta
caataccctggcgaggtcgtggtgcatgtcatccgcgaaaaccacgccaaagccatcgcc
cgctag
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