Helicobacter felistomachi: NHP21005_08770
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Entry
NHP21005_08770 CDS
T10843
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hfi Helicobacter felistomachi
Pathway
hfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NHP21005_08770 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hfi03021
]
NHP21005_08770 (rpoA)
03400 DNA repair and recombination proteins [BR:
hfi03400
]
NHP21005_08770 (rpoA)
Enzymes [BR:
hfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NHP21005_08770 (rpoA)
Transcription machinery [BR:
hfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NHP21005_08770 (rpoA)
DNA repair and recombination proteins [BR:
hfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NHP21005_08770 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BEG57189
LinkDB
All DBs
Position
809754..810758
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AA seq
334 aa
AA seq
DB search
MKVIKTAPHVPTDISVEKISDRQIRVCVSAFESGYAITLAHPIRRLLLQSSVGYAPIGIK
IENVAHEFDSVRGMSEDAALFIANLKNIRLVGQVKNPDEQLVVHYSFKGPAKLCGKHLEN
EGVGVVDKEAYLATINEDVQLDFALIVQRGMGYVPSESIRGLIPSDYIPLDAYFTPIKKV
VYNIENMLVDGNPNFERVVFDIESDGQVDPQHAFQEAVKTMHAQMHIFSTSMAHSKAYAL
EDSLEVKELVRKVEDLDLSARCFNCLDKIGIKYIGELVLMDAYELKGIKNLGKKSYDEIA
EKLEQLKYPVGQELSPEFKASLKARIDKLKSEDN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgattaaaacagcgccccatgtccccacggacatcagcgttgagaaaatcagt
gaccggcagattcgcgtttgtgtgtccgcttttgaaagcggctacgccatcaccctagcg
caccctatccgccgtctgctcttgcaaagctccgtggggtatgcgcccatcggcattaaa
attgaaaatgtcgcccacgagtttgactctgtgcgggggatgtctgaagacgctgctctt
ttcatcgctaaccttaaaaacatccgcctagtggggcaagtaaaaaaccctgatgagcaa
cttgtggtgcattactctttcaaaggtccagcgaagttgtgcggaaaacacttagaaaac
gaaggcgtgggcgtggtcgataaagaagcgtatttggccaccatcaatgaagatgtgcaa
ctagactttgccctaattgtccaaaggggcatgggctatgtgcctagtgagagcattagg
gggctgattcctagcgattacatccccctagatgcctacttcacgcccattaaaaaagtg
gtttacaacattgaaaacatgctcgtggatggcaacccgaattttgaaagggtggtgttt
gacattgagagcgatgggcaagtcgatccccaacacgctttccaagaggcagtaaagacc
atgcacgcgcagatgcatattttcagcaccagcatggcgcactccaaagcctacgcccta
gaggacagcctagaggtcaaagagcttgtgcgtaaagtggaggacttggacctaagcgca
aggtgctttaattgcctagataaaatcgggatcaaatacatcggggagcttgtgctgatg
gacgcttacgagcttaagggcattaaaaatctaggcaagaagtcctacgatgagatcgct
gaaaaattagaacaactcaaataccccgtggggcaagaactctcccctgagtttaaagca
tcgctcaaagcacggatcgataaattaaaaagtgaggacaattaa
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